RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 DBF4BQ8NFT6 615 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 BEST2Q8NFU1 509 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 OR5B17Q8NGF7 314 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TAS1R2Q8TE23 839 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NT5C1BQ96P26 610 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CRACR2AQ9BSW2 395 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 OSBPL7Q9BZF2 842 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 GANQ9H2C0 597 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 VRTNQ9H8Y1 702 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 RSAD1Q9HA92 442 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SIX2Q9NPC8 291 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TMEM161AQ9NX61 479 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 LUC7L2Q9Y383 392 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 HES2Q9Y543 173 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ZFYVE26Q68DK2 2539 aa13.23□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TTC3P53804 2025 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 HOXA2O43364 376 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PHACTR2O75167 634 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NOL4O94818 638 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ASS1P00966 412 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 HLA-DRAP01903 254 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SLC9A1P19634 815 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PAX3P23760 479 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TBXAS1P24557 533 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CASP14P31944 242 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TRPC3Q13507 836 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NCOA4Q13772 614 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SGSM1Q2NKQ1 1148 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 LRRC52Q8N7C0 313 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 LINC01599Q8WXQ3 324 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NKD2Q969F2 451 aaPredicted RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 DNAJC7Q99615 494 aa13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 NAA15Q9BXJ9 866 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TDRD15B5MCY1 1934 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 SMIM28A0A1B0GU29 152 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 BAIAP3O94812 1187 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 VNN1O95497 513 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 FECHP22830 423 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 AKAP5P24588 427 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 LRPAP1P30533 357 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 HNRNPH3P31942 346 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 KRT9P35527 623 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PNPLA4P41247 253 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 KLK7P49862 253 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 RBP5P82980 135 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 GRIK3Q13003 919 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ST3GAL2Q16842 350 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 CCDC186Q7Z3E2 898 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 C1orf127Q8N9H9 656 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 TC2NQ8N9U0 490 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 MRPL38Q96DV4 380 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ASIC4Q96FT7 647 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 PPP1R10Q96QC0 940 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 APOL6Q9BWW8 343 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ABHD10Q9NUJ1 306 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.29
CACNA1C-IT3-201ENST00000542680 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ENPP3O14638 875 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 PTGESO14684 152 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 THP07101 528 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CCDC172P0C7W6 258 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 P4HA1P13674 534 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 LTBRP36941 435 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 MLH1P40692 756 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 MFAP3P55082 362 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 NOP14P78316 857 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CDK17Q00537 523 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 MYO1EQ12965 1108 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 IKBKEQ14164 716 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 GLB1LQ6UWU2 654 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 RTN4RL1Q86UN2 441 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CXorf38Q8TB03 319 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 BAP1Q92560 729 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ZNF560Q96MR9 790 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 UROC1Q96N76 676 aa13.2□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SPAG5Q96R06 1193 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms