RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NUP58Q9BVL2 599 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 FAM124BQ9H5Z6 455 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-205ENST00000542541 UBE2TQ9NPD8 197 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-205ENST00000542541 PCDHB8Q9UN66 801 aa24.76■■□□□ 1.55
HOMER3-205ENST00000542541 I3L4J1 428 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 CUL2Q13617 745 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 FAM171A1Q5VUB5 890 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 METTL23Q86XA0 190 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 TMEM86AQ8N2M4 240 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 TTC39CQ8N584 583 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 JAKMIP2Q96AA8 810 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 ELMO3Q96BJ8 720 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 IQCDQ96DY2 449 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 GPR62Q9BZJ7 368 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 SIX2Q9NPC8 291 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 POLIQ9UNA4 740 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 ARHGEF15O94989 841 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 TRIM21P19474 475 aaKnown RBP24.75■■□□□ 1.55
HOMER3-205ENST00000542541 TYMPP19971 482 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 ASPAP45381 313 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 KLK7P49862 253 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 YWHAEP62258 255 aaKnown RBP24.75■■□□□ 1.55
HOMER3-205ENST00000542541 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.75■■□□□ 1.55
HOMER3-205ENST00000542541 RRAGAQ7L523 313 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 SPATA18Q8TC71 538 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 BCO2Q9BYV7 579 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 FBXL5Q9UKA1 691 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 MTUS1Q9ULD2 1270 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 LZTS1Q9Y250 596 aa24.75■■□□□ 1.55
HOMER3-205ENST00000542541 TACC1O75410 805 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 EFEMP2O95967 443 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 UCHL3P15374 230 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 SOWAHAQ2M3V2 549 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 USP41Q3LFD5 358 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 SPECC1LQ69YQ0 1117 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 LIMS2Q7Z4I7 341 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 VSTM4Q8IW00 320 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 ARHGEF19Q8IW93 802 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 DNAJC12Q9UKB3 198 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.74■■□□□ 1.55
HOMER3-205ENST00000542541 SCN1AP35498 2009 aa24.74■■□□□ 1.55
HOMER3-205ENST00000542541 ITIH6Q6UXX5 1313 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 SOD2P04179 222 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 CYP11A1P05108 521 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 APBA1Q02410 837 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 UBE3AQ05086 875 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 SMYD5Q6GMV2 418 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 KIAA1841Q6NSI8 718 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 DPY19L2P1Q6NXN4 242 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 SCARA5Q6ZMJ2 495 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 FBXO22Q8NEZ5 403 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 TTPALQ9BTX7 342 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 L1RE1Q9UN81 338 aa24.73■■□□□ 1.55
HOMER3-205ENST00000542541 ADCY5O95622 1261 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 FGFR3P22607 806 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 BMS1Q14692 1282 aaKnown RBP24.72■■□□□ 1.55
HOMER3-205ENST00000542541 PTPN21Q16825 1174 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 FIGNQ5HY92 759 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 WSCD1Q658N2 575 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 CEP57Q86XR8 500 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 RNF168Q8IYW5 571 aaPredicted RBP24.72■■□□□ 1.55
HOMER3-205ENST00000542541 ADGRF2Q8IZF7 708 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 PDCL2Q8N4E4 241 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 NOL4O94818 638 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 WEE2P0C1S8 567 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 LHX1P48742 406 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 POLR2FP61218 127 aaKnown RBP24.72■■□□□ 1.55
HOMER3-205ENST00000542541 YWHAHQ04917 246 aaPredicted RBP24.72■■□□□ 1.55
HOMER3-205ENST00000542541 PDXDC1Q6P996 788 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 CACNA2D4Q7Z3S7 1137 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 HERC2P3Q9BVR0 1158 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 EDEM3Q9BZQ6 932 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 DNAI2Q9GZS0 605 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 GANQ9H2C0 597 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 SNX25Q9H3E2 840 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 SMYD3Q9H7B4 428 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 CEP72Q9P209 647 aa24.72■■□□□ 1.55
HOMER3-205ENST00000542541 WARSP23381 471 aaKnown RBP24.71■■□□□ 1.55
HOMER3-205ENST00000542541 TKTP29401 623 aaKnown RBP24.71■■□□□ 1.55
HOMER3-205ENST00000542541 OVOS1Q6IE37 1185 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 IQCEQ6IPM2 695 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 GJB7Q6PEY0 223 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 VPS52Q8N1B4 723 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 THEM5Q8N1Q8 247 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 ANP32BQ92688 251 aaKnown RBP24.71■■□□□ 1.55
HOMER3-205ENST00000542541 VN1R3Q9BXE9 311 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 STK33Q9BYT3 514 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 CHST7Q9NS84 486 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 SSX2IPQ9Y2D8 614 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 TIMM13Q9Y5L4 95 aaPredicted RBP24.71■■□□□ 1.55
HOMER3-205ENST00000542541 FHOD1Q9Y613 1164 aa24.71■■□□□ 1.55
HOMER3-205ENST00000542541 H3BNC9 293 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 GNL1P36915 607 aaPredicted RBP24.7■■□□□ 1.54
HOMER3-205ENST00000542541 CDH8P55286 799 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 RAPGEF1Q13905 1077 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 TRIM14Q14142 442 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 ANKS3Q6ZW76 656 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 TAS1R1Q7RTX1 841 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 GPR65Q8IYL9 337 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 OR6B3Q8NGW1 331 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms