RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 MFSD14AQ96MC6 490 aa21.66■■□□□ 1.06
CACNA2D4-215ENST00000542340 EPHX3Q9H6B9 360 aa21.66■■□□□ 1.06
CACNA2D4-215ENST00000542340 AFF4Q9UHB7 1163 aaKnown RBP21.66■■□□□ 1.06
CACNA2D4-215ENST00000542340 PTPRJQ12913 1337 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 C2CD4DB7Z1M9 353 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 XYLBO75191 536 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 CPB1P15086 417 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 SP100P23497 879 aaPredicted RBP21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 PNOCQ13519 176 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 METTL23Q86XA0 190 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 ELOA2Q8IYF1 753 aaPredicted RBP21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 TCEAL8Q8IYN2 117 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 ZDHHC14Q8IZN3 488 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 GUF1Q8N442 669 aaKnown RBP21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 TDRD5Q8NAT2 981 aaKnown RBP21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 OR5B17Q8NGF7 314 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 ACSF2Q96CM8 615 aaPredicted RBP21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 GSDMAQ96QA5 445 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 FNBP1Q96RU3 617 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 RMND1Q9NWS8 449 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 SIX4Q9UIU6 781 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 HOOK1Q9UJC3 728 aaKnown RBP21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 TRAF3IP3Q9Y228 551 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 SCN1AP35498 2009 aa21.65■■□□□ 1.06
CACNA2D4-215ENST00000542340 CLUHO75153 1309 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 PRRG1O14668 218 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 CALUO43852 315 aaPredicted RBP21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 KRT19P08727 400 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 GPR17Q13304 367 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 LMBRD2Q68DH5 695 aaPredicted RBP21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 CCDC127Q96BQ5 260 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 FAM84AQ96KN4 292 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 CGRRF1Q99675 332 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 C1QTNF1Q9BXJ1 281 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 MUTYHQ9UIF7 546 aa21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 R3HCC1Q9Y3T6 440 aaKnown RBP21.64■■□□□ 1.05
CACNA2D4-215ENST00000542340 C2orf16Q68DN1 1984 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 CCL16O15467 120 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 SMC2O95347 1197 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 NR3C1P04150 777 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 DLATP10515 647 aaKnown RBP21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 TNNI1P19237 187 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 ADCY1Q08828 1119 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 SCARA3Q6AZY7 606 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 RNF19BQ6ZMZ0 732 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 THEM5Q8N1Q8 247 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 SPATA20Q8TB22 786 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 CYP4F11Q9HBI6 524 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 GDAP2Q9NXN4 497 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 MAPK8IP1Q9UQF2 711 aa21.63■■□□□ 1.05
CACNA2D4-215ENST00000542340 GADD45BO75293 160 aaPredicted RBP21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 SEC24AO95486 1093 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 MYO1EQ12965 1108 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 NFIL3Q16649 462 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 WSCD1Q658N2 575 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 TRAPPC11Q7Z392 1133 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 GRASPQ7Z6J2 395 aaPredicted RBP21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 GZF1Q9H116 711 aaPredicted RBP21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.62■■□□□ 1.053e-10■■■■■ 35.3
CACNA2D4-215ENST00000542340 PCDHA5Q9Y5H7 936 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 DENND4AQ7Z401 1863 aa21.62■■□□□ 1.05
CACNA2D4-215ENST00000542340 KINO60870 393 aaKnown RBP21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 HUS1O60921 280 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 LRG1P02750 347 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 OR4Q2P0C623 313 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 BFSP1Q12934 665 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 PARD3BQ8TEW8 1205 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 SMARCE1Q969G3 411 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 GTPBP4Q9BZE4 634 aaKnown RBP21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 POLIQ9UNA4 740 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 INSL5Q9Y5Q6 135 aa21.61■■□□□ 1.05
CACNA2D4-215ENST00000542340 FSHRP23945 695 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 AP3M2P53677 418 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 CLDN10P78369 228 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 PTPN21Q16825 1174 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 COBLL1Q53SF7 1204 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 ZNF658Q5TYW1 1059 aaPredicted RBP21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 TMEM86AQ8N2M4 240 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 TOP6BLQ8N6T0 577 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 OR10T2Q8NGX3 314 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 ZNF516Q92618 1163 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 HPDLQ96IR7 371 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 RTP3Q9BQQ7 232 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 ZCWPW1Q9H0M4 648 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 LIMD1Q9UGP4 676 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 FRMD4BQ9Y2L6 1034 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 SNX9Q9Y5X1 595 aa21.6■■□□□ 1.05
CACNA2D4-215ENST00000542340 N4BP1O75113 896 aaKnown RBP21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 RPL13P26373 211 aaKnown RBP21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 GBP2P32456 591 aaPredicted RBP21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 CASP4P49662 377 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 CENPPQ6IPU0 288 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 DPH6Q7L8W6 267 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 SMYD4Q8IYR2 804 aaPredicted RBP21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 PDCL2Q8N4E4 241 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 SPATA18Q8TC71 538 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 PLEKHO2Q8TD55 490 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 EDAQ92838 391 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 PGLYRP2Q96PD5 576 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 TMEM209Q96SK2 561 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms