RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	YWHAG	P61981	247 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	DR1	Q01658	176 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	FBXO47	Q5MNV8	452 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	HTATIP2	Q9BUP3	242 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	RNF186	Q9NXI6	227 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	DSE	Q9UL01	958 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328		H7C4K7	107 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	RNF40	O75150	1001 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	AMH	P03971	560 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	PNMA6A	P0CW24	399 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	RALA	P11233	206 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	KLK7	P49862	253 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	ARHGAP1	Q07960	439 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	PCDHA2	Q9Y5H9	948 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	TAF1L	Q8IZX4	1826 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	RECQL4	O94761	1208 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	1e-6	■■■■□ 23.3
ABCB8-222	ENST00000542328	ACADSB	P45954	432 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	RAD9B	Q6WBX8	426 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	SLC9A9	Q8IVB4	645 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	TMEM199	Q8N511	208 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	SLC35C1	Q96A29	364 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	LENG1	Q96BZ8	264 aa	Predicted RBP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	TBC1D31	Q96DN5	1066 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	RBM41	Q96IZ5	413 aa	Known RBP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	OSBPL9	Q96SU4	736 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	ANAPC5	Q9UJX4	755 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	TBKBP1	A7MCY6	615 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	LACTBL1	A8MY62	500 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	LCP1	P13796	627 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	CDK17	Q00537	523 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	BMT2	Q1RMZ1	405 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	GJB7	Q6PEY0	223 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	GLIS3	Q8NEA6	775 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	MORC4	Q8TE76	937 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	ATP2A3	Q93084	1043 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	FMO2	Q99518	471 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	ACO2	Q99798	780 aa	Known RBP	13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	TMEM117	Q9H0C3	514 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	ZWILCH	Q9H900	591 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	COL24A1	Q17RW2	1714 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	MCF2L	O15068	1137 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	MAPK13	O15264	365 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	POMC	P01189	267 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	TFDP2	Q14188	446 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	CDT1	Q9H211	546 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	ADAMTS5	Q9UNA0	930 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328		I3L4J1	428 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	PRRG1	O14668	218 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	OPLAH	O14841	1288 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	KRT3	P12035	628 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	SSTR3	P32745	418 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	GJA5	P36382	358 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	IFNAR2	P48551	515 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	BZW1	Q7L1Q6	419 aa	Known RBP	13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	MED15	Q96RN5	788 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	PLAGL2	Q9UPG8	496 aa		13.08	□□□□□ -0.32
ABCB8-222	ENST00000542328	ATP1A1	P05023	1023 aa	Known RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	FAM200B	P0CF97	657 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	RGS7	P49802	495 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	SLC12A2	P55011	1212 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	ITK	Q08881	620 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	ZNF211	Q13398	564 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	TTC31	Q49AM3	519 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	COBLL1	Q53SF7	1204 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	CCNY	Q8ND76	341 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	UBE2Q2	Q8WVN8	375 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	UVRAG	Q9P2Y5	699 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	ST3GAL5	Q9UNP4	418 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	TREH	O43280	583 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	KRT7	P08729	469 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	VDR	P11473	427 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	DARS	P14868	501 aa	Known RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	CTCF	P49711	727 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	VEGFB	P49765	207 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	CCL23	P55773	120 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	BTG3	Q14201	252 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	LRRC31	Q6UY01	552 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	RASSF4	Q9H2L5	321 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	LAMB2	P55268	1798 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	CASTOR2	A6NHX0	329 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	FOXN3	O00409	490 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	DPYSL4	O14531	572 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	GJB1	P08034	283 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	LHX1	P48742	406 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	FOXR2	Q6PJQ5	311 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	TADA2B	Q86TJ2	420 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	WHAMM	Q8TF30	809 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	GAD1	Q99259	594 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	HEMGN	Q9BXL5	484 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	PLEKHA5	Q9HAU0	1116 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	CACNA1S	Q13698	1873 aa		13.07	□□□□□ -0.32
ABCB8-222	ENST00000542328	TISP43	B9A030	160 aa		13.06	□□□□□ -0.32
ABCB8-222	ENST00000542328	APOE	P02649	317 aa		13.06	□□□□□ -0.32
ABCB8-222	ENST00000542328	CD52	P31358	61 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms