RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CEP72Q9P209 647 aa16.92■□□□□ 0.3
VPS33A-206ENST00000542310 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
VPS33A-206ENST00000542310 TIMM13Q9Y5L4 95 aaPredicted RBP16.92■□□□□ 0.3
VPS33A-206ENST00000542310 TICRRQ7Z2Z1 1910 aa16.92■□□□□ 0.3
VPS33A-206ENST00000542310 MTMR11A4FU01 709 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 PPP6R2O75170 966 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 GCNT3O95395 438 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 GARTP22102 1010 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 ADSSP30520 456 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 TAF6P49848 677 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 SLC44A4Q53GD3 710 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 CRELD2Q6UXH1 353 aaPredicted RBP16.91■□□□□ 0.3
VPS33A-206ENST00000542310 BRSK2Q8IWQ3 736 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 DEPDC1BQ8WUY9 529 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 FOXQ1Q9C009 403 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 TNMDQ9H2S6 317 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 CUEDC2Q9H467 287 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 TRPV4Q9HBA0 871 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 ZFP14Q9HCL3 533 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 ASB3Q9Y575 518 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 DENND4CQ5VZ89 1909 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 COL4A3Q01955 1670 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 FAM186AA6NE01 2351 aa16.91■□□□□ 0.3
VPS33A-206ENST00000542310 A0A087X0B3 334 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 SPTLC1O15269 473 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 MOSPD3O75425 235 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 YEATS4O95619 227 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 LDHAP00338 332 aaKnown RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 DCNP07585 359 aaKnown RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 OR4Q2P0C623 313 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 PNPLA4P41247 253 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 EPHB3P54753 998 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 SMARCB1Q12824 385 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 SNW1Q13573 536 aaKnown RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 STK38Q15208 465 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 SV2CQ496J9 727 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 FAM78AQ5JUQ0 283 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 CENPPQ6IPU0 288 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 POTEHQ6S545 545 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 FRMD5Q7Z6J6 570 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 TMC8Q8IU68 726 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 EFCAB13Q8IY85 973 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 C2orf15Q8WU43 125 aaKnown RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 SMARCD2Q92925 531 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 NKD2Q969F2 451 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 PGLYRP2Q96PD5 576 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 LRRC27Q9C0I9 530 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 DNAJC25Q9H1X3 360 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 SEMA4AQ9H3S1 761 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 DPP3Q9NY33 737 aa16.9■□□□□ 0.3
VPS33A-206ENST00000542310 KIF26AQ9ULI4 1882 aaPredicted RBP16.9■□□□□ 0.3
VPS33A-206ENST00000542310 KIAA0391O15091 583 aaKnown RBP16.89■□□□□ 0.29
VPS33A-206ENST00000542310 SPTLC2O15270 562 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 FGF19O95750 216 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 IDEP14735 1019 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 CASP5P51878 434 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 KCNA1Q09470 495 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 DUSP4Q13115 394 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 STXBP4Q6ZWJ1 553 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 METTL23Q86XA0 190 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 C1orf210Q8IVY1 113 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 CCDC65Q8IXS2 484 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 HS6ST3Q8IZP7 471 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 OR10T2Q8NGX3 314 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 E2F7Q96AV8 911 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 LRRC3Q9BY71 257 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 BCO2Q9BYV7 579 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 PLA2G2FQ9BZM2 168 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 ZCWPW1Q9H0M4 648 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 CRISPLD1Q9H336 500 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 LTB4R2Q9NPC1 389 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 TRPV5Q9NQA5 729 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 CFAP54Q96N23 3096 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 CACNA1IQ9P0X4 2223 aa16.89■□□□□ 0.29
VPS33A-206ENST00000542310 ZFHX2Q9C0A1 2572 aaPredicted RBP16.88■□□□□ 0.29
VPS33A-206ENST00000542310 OBSL1O75147 1896 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 MYL4P12829 197 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 GLULP15104 373 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 E2F4Q16254 413 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 ZC3H14Q6PJT7 736 aaKnown RBP16.88■□□□□ 0.29
VPS33A-206ENST00000542310 TPRG1Q6ZUI0 275 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 ITIH5Q86UX2 942 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 SYCP3Q8IZU3 236 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 SHKBP1Q8TBC3 707 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 IRF7Q92985 503 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 PSMG2Q969U7 264 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 NELL2Q99435 816 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 PYM1Q9BRP8 204 aaKnown RBP16.88■□□□□ 0.29
VPS33A-206ENST00000542310 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
VPS33A-206ENST00000542310 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms