RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 UBR7Q8N806 425 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 RBBP8NLQ8NC74 664 aaPredicted RBP9.27□□□□□ -0.92
THBS3-210ENST00000541576 DDX1Q92499 740 aaKnown RBP9.27□□□□□ -0.92
THBS3-210ENST00000541576 FAXDC2Q96IV6 333 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 CISHQ9NSE2 258 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 RNF19AQ9NV58 838 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 TUBGCP4Q9UGJ1 667 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 CNTN6Q9UQ52 1028 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 XPOTO43592 962 aaKnown RBP9.27□□□□□ -0.93
THBS3-210ENST00000541576 BUB1O43683 1085 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 WEE2P0C1S8 567 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 P4HA1P13674 534 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 KCNE1P15382 129 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 YWHAEP62258 255 aaKnown RBP9.27□□□□□ -0.93
THBS3-210ENST00000541576 MYO1EQ12965 1108 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 CTU1Q7Z7A3 348 aaKnown RBP9.27□□□□□ -0.93
THBS3-210ENST00000541576 SRLQ86TD4 932 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 CAGE1Q8TC20 777 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 C18orf25Q96B23 403 aaPredicted RBP9.27□□□□□ -0.93
THBS3-210ENST00000541576 POLIQ9UNA4 740 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 ATP8B3O60423 1300 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 ENC1O14682 589 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 TADA3O75528 432 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 MMEP08473 750 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 ITGA4P13612 1032 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 RAB27AP51159 221 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 GALCP54803 685 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 FMO1Q01740 532 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 LONRF2Q1L5Z9 754 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 ZNF677Q86XU0 584 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 INTUQ9ULD6 942 aa9.27□□□□□ -0.93
THBS3-210ENST00000541576 CTAGE9A4FU28 777 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 STAU1O95793 577 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 CD4P01730 458 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 BRD2P25440 801 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 GNA15P30679 374 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ZNF132P52740 706 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 NAP1L1P55209 391 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 PACS2Q86VP3 889 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 FAM126BQ8IXS8 530 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 RNF10Q8N5U6 811 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 NAPGQ99747 312 aaPredicted RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 TRAIPQ9BWF2 469 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 BCO2Q9BYV7 579 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 TLR3O15455 904 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 MGEA5O60502 916 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 TACC1O75410 805 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.93
THBS3-210ENST00000541576 ATP1A1P05023 1023 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 GZMAP12544 262 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 TNNC1P63316 161 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 DSC3Q14574 896 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 TTC19Q6DKK2 380 aaPredicted RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 FBXO46Q6PJ61 603 aaPredicted RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 ZFP42Q96MM3 310 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ADAM2Q99965 735 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 JRKLQ9Y4A0 524 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 KIAA0100Q14667 2235 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 PDCD11Q14690 1871 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 SCN1AP35498 2009 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 MEIS3P2A8K0S8 358 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 BTNL10A8MVZ5 291 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ZNF623O75123 536 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 HSPA8P11142 646 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 ATF7P17544 494 aaPredicted RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 CYP3A5P20815 502 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 RAP1GAPP47736 663 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 AMPD2Q01433 879 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 BFSP2Q13515 415 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 MBTPS1Q14703 1052 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ZNF394Q53GI3 561 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 HSP90B2PQ58FF3 399 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 DNAJC21Q5F1R6 531 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 C9orf57Q5W0N0 161 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 LRRC8DQ7L1W4 858 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 MRPL10Q7Z7H8 261 aaKnown RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 LRRC52Q8N7C0 313 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 TRIM58Q8NG06 486 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 CTNNBL1Q8WYA6 563 aaPredicted RBP9.26□□□□□ -0.93
THBS3-210ENST00000541576 LPPQ93052 612 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ZNF333Q96JL9 665 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 ALS2CR12Q96Q35 445 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 SMYD3Q9H7B4 428 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 CYP3A43Q9HB55 503 aa9.26□□□□□ -0.93
THBS3-210ENST00000541576 MYH10P35580 1976 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 A0A0U1RQF3 1178 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 ANKRD62A6NC57 917 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 PTGESO14684 152 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 PPEF2O14830 753 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 PQBP1O60828 265 aaKnown RBP9.25□□□□□ -0.93
THBS3-210ENST00000541576 RTN2O75298 545 aa9.25□□□□□ -0.93
THBS3-210ENST00000541576 FTLP02792 175 aaPredicted RBP9.25□□□□□ -0.93
THBS3-210ENST00000541576 CFHP08603 1231 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms