RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PON1P27169 355 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 JAM2P57087 298 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 IL9RQ01113 521 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 LY6KQ17RY6 165 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 TNFAIP8L3Q5GJ75 292 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 CAPRIN2Q6IMN6 1127 aaKnown RBP11.06□□□□□ -0.64
CHFR-219ENST00000541341 USP17L6PQ6QN14 398 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 RASGRP4Q8TDF6 673 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 CCDC28BQ9BUN5 200 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 DDX47Q9H0S4 455 aaKnown RBP11.06□□□□□ -0.64
CHFR-219ENST00000541341 RABEP2Q9H5N1 569 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 OLFML3Q9NRN5 406 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 COL20A1Q9P218 1284 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 CPSF2Q9P2I0 782 aaKnown RBP11.06□□□□□ -0.64
CHFR-219ENST00000541341 Q9Y3F1 56 aa11.06□□□□□ -0.64
CHFR-219ENST00000541341 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 TTI1O43156 1089 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 RTN2O75298 545 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 MTA2O94776 668 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 GJB6O95452 261 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 GAS8O95995 478 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 GSTA2P09210 222 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 IQCF3P0C7M6 154 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 GZMAP12544 262 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 ACTN1P12814 892 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 TMOD1P28289 359 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 CETN2P41208 172 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 BNIP1Q12981 228 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
CHFR-219ENST00000541341 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 UBE2SQ16763 222 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 AP1ARQ63HQ0 302 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 HS2ST1Q7LGA3 356 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
CHFR-219ENST00000541341 GPBP1Q86WP2 473 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 C12orf50Q8NA57 414 aaPredicted RBP11.05□□□□□ -0.64
CHFR-219ENST00000541341 ZNF398Q8TD17 642 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 TMEM174Q8WUU8 243 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 NSMCE1Q8WV22 266 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 AFG1LQ8WV93 481 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 MAGEB18Q96M61 343 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 TAAR1Q96RJ0 339 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 ANO3Q9BYT9 981 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
CHFR-219ENST00000541341 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 ZDHHC18Q9NUE0 388 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.643e-10■■□□□ 12.4
CHFR-219ENST00000541341 FRMD4BQ9Y2L6 1034 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
CHFR-219ENST00000541341 MTCH2Q9Y6C9 303 aa11.05□□□□□ -0.64
CHFR-219ENST00000541341 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 LRRD1A4D1F6 860 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 KIAA0391O15091 583 aaKnown RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 MAPK13O15264 365 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 AHCYL1O43865 530 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 CYP3A4P08684 503 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 SUPT20HL2P0C7V6 817 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 EDNRBP24530 442 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 CTNNA2P26232 953 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 RPA1P27694 616 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 HOXA13P31271 388 aaPredicted RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 GCKP35557 465 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 SREBF1P36956 1147 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 GALCP54803 685 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 RWDD2BP57060 319 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 TAP1Q03518 808 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 ARID5AQ03989 594 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 GRIK3Q13003 919 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 LBRQ14739 615 aaKnown RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 STAT4Q14765 748 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 EPHA7Q15375 998 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 BRDTQ58F21 947 aaPredicted RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 INTS8Q75QN2 995 aaKnown RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 SPATA21Q7Z572 469 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 USP37Q86T82 979 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 JAMLQ86YT9 394 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 ARHGAP18Q8N392 663 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 SYT2Q8N9I0 419 aaPredicted RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 GDPD5Q8WTR4 605 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 SCFD1Q8WVM8 642 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 ART4Q93070 314 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 TRIM11Q96F44 468 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 ELAC2Q9BQ52 826 aaKnown RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 PDCD2LQ9BRP1 358 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 PXMP2Q9NR77 195 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 TMEM260Q9NX78 707 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 LARSQ9P2J5 1176 aaKnown RBP11.04□□□□□ -0.64
CHFR-219ENST00000541341 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
CHFR-219ENST00000541341 TTC28Q96AY4 2481 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms