RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TRDNQ13061 729 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 MTAPQ13126 283 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 FZD5Q13467 585 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 SIM2Q14190 667 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 SART3Q15020 963 aaKnown RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 LPAL2Q16609 132 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 UBE2SQ16763 222 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF423Q2M1K9 1284 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 PRRT3Q5FWE3 981 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 EFCAB12Q6NXP0 572 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 LILRA6Q6PI73 481 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 LRSAM1Q6UWE0 723 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 DTHD1Q6ZMT9 781 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 PRR23BQ6ZRT6 265 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 NIPA1Q7RTP0 329 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF280BQ86YH2 543 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 CKAP2LQ8IYA6 745 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 RNF168Q8IYW5 571 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 URGCPQ8TCY9 931 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 MAP4K1Q92918 833 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 LPPQ93052 612 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 PGBD4Q96DM1 585 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 KLHDC7BQ96G42 594 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 FAM167AQ96KS9 214 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 FAM193BQ96PV7 902 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 GCOM2Q9BZD3 368 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 GBP3Q9H0R5 595 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 C12orf49Q9H741 205 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 LY9Q9HBG7 655 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 KCNK4Q9NYG8 393 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 FNIP2Q9P278 1114 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 INPP5FQ9Y2H2 1132 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 CNTNAP2Q9UHC6 1331 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 DENND4AQ7Z401 1863 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 LOC400499M0QZD8 3231 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 HIP1O00291 1037 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 MAN2B1O00754 1011 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 DHX15O43143 795 aaKnown RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 B4GALT3O60512 393 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 FBXO24O75426 580 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ECI2O75521 394 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 DDAH1O94760 285 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 DDHD2O94830 711 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 HNRNPA1P09651 372 aaKnown RBP eCLIP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 C1QTNF9P0C862 333 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 SPATA31D3P0C874 917 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ESRRAP11474 423 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF16P17020 682 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 FGFR4P22455 802 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 SFPQP23246 707 aaKnown RBP eCLIP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ITPKAP23677 461 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 DSG1Q02413 1049 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 CREMQ03060 361 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 PCDH1Q08174 1060 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 PSMD2Q13200 908 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 C20orf194Q5TEA3 1177 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ANKRD45Q5TZF3 282 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 TWF2Q6IBS0 349 aaKnown RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF746Q6NUN9 644 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 CWC27Q6UX04 472 aaKnown RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 SPATA31D4Q6ZUB0 917 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 TPRG1Q6ZUI0 275 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 TAS1R1Q7RTX1 841 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 MRPL10Q7Z7H8 261 aaKnown RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 PALB2Q86YC2 1186 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 SMAP1Q8IYB5 467 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 CACTIN-AS1Q8N1I8 211 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 LRRC71Q8N4P6 559 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 C3orf58Q8NDZ4 430 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 ST13P5Q8NFI4 369 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 CTCFLQ8NI51 663 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 FGF13Q92913 245 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 RILPL2Q969X0 211 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 MBOAT7Q96N66 472 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 SCLT1Q96NL6 688 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 PHF20Q9BVI0 1012 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 INO80BQ9C086 356 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 CLEC4MQ9H2X3 399 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-214ENST00000540865 CHST7Q9NS84 486 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 NRBP2Q9NSY0 501 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 FAM105AQ9NUU6 356 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 F5P12259 2224 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 FREM2Q5SZK8 3169 aa5.17□□□□□ -1.58
SNHG1-214ENST00000540865 SHISA7A6NL88 538 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 SRRM3A6NNA2 597 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 MEIS3P2A8K0S8 358 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 DDX39AO00148 427 aaKnown RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 IPO5O00410 1097 aaKnown RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 ADAM11O75078 769 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 KCNK5O95279 499 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 PAPSS2O95340 614 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-214ENST00000540865 WISP1O95388 367 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 POU2F2P09086 479 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 USP17L7P0C7H9 530 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 MYBP10242 640 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 HOXA9P31269 272 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF76P36508 570 aa5.16□□□□□ -1.58
SNHG1-214ENST00000540865 CXCL12P48061 93 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms