RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SLC38A7Q9NVC3 462 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 VPS13AQ96RL7 3174 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 KMT2EQ8IZD2 1858 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 IKBKBO14920 756 aa18■□□□□ 0.47
UBC-208ENST00000540700 ITGB3P05106 788 aa18■□□□□ 0.47
UBC-208ENST00000540700 TMEM191BP0C7N4 346 aa18■□□□□ 0.47
UBC-208ENST00000540700 KRT13P13646 458 aa18■□□□□ 0.47
UBC-208ENST00000540700 POLR2BP30876 1174 aaKnown RBP18■□□□□ 0.47
UBC-208ENST00000540700 ERVFC1P60507 584 aa18■□□□□ 0.47
UBC-208ENST00000540700 FOXK2Q01167 660 aa18■□□□□ 0.47
UBC-208ENST00000540700 ENPEPQ07075 957 aa18■□□□□ 0.47
UBC-208ENST00000540700 HSP90AA2PQ14568 343 aaPredicted RBP18■□□□□ 0.47
UBC-208ENST00000540700 DUSP6Q16828 381 aa18■□□□□ 0.47
UBC-208ENST00000540700 TPD52L1Q16890 204 aaPredicted RBP18■□□□□ 0.47
UBC-208ENST00000540700 DUOXA2Q1HG44 320 aa18■□□□□ 0.47
UBC-208ENST00000540700 LLGL2Q6P1M3 1020 aa18■□□□□ 0.47
UBC-208ENST00000540700 SV2AQ7L0J3 742 aa18■□□□□ 0.47
UBC-208ENST00000540700 ASCL5Q7RTU5 278 aa18■□□□□ 0.47
UBC-208ENST00000540700 LUZP1Q86V48 1076 aa18■□□□□ 0.47
UBC-208ENST00000540700 IGSF21Q96ID5 467 aa18■□□□□ 0.47
UBC-208ENST00000540700 MMRN2Q9H8L6 949 aa18■□□□□ 0.47
UBC-208ENST00000540700 FAN1Q9Y2M0 1017 aa18■□□□□ 0.47
UBC-208ENST00000540700 I3L4J1 428 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 FGF18O76093 207 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 ALDH2P05091 517 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 ATP1A3P13637 1013 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 BRCC3P46736 316 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 ZACNQ401N2 412 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 PLPP4Q5VZY2 271 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 TAS1R1Q7RTX1 841 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 APTXQ7Z2E3 356 aaKnown RBP17.99■□□□□ 0.47
UBC-208ENST00000540700 GAS2L3Q86XJ1 694 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 RNF168Q8IYW5 571 aaPredicted RBP17.99■□□□□ 0.47
UBC-208ENST00000540700 ANKRD36BP1Q96IX9 119 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 RIPOR3Q96MK2 946 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 UROC1Q96N76 676 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 TSPY26PQ9H489 355 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 METTL14Q9HCE5 456 aaKnown RBP17.99■□□□□ 0.47
UBC-208ENST00000540700 AAASQ9NRG9 546 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 GVINP1Q7Z2Y8 2422 aa17.99■□□□□ 0.47
UBC-208ENST00000540700 DMDP11532 3685 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 KCNJ18B7U540 433 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 TMEM189-UBE2V1I3L0A0 370 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 GALR2O43603 387 aaPredicted RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 FGFR1OPO95684 399 aaKnown RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 GNA14O95837 355 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 RPL9P32969 192 aaKnown RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 ALDH7A1P49419 539 aaKnown RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 UBE3AQ05086 875 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 KCNJ12Q14500 433 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 TCP11X2Q5H9J9 407 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 MIIPQ5JXC2 388 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 TCERG1LQ5VWI1 586 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 ANKRD54Q6NXT1 300 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 DCLRE1AQ6PJP8 1040 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 FAM200AQ8TCP9 573 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 TAS1R2Q8TE23 839 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 SEMA4DQ92854 862 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 CDCA3Q99618 268 aaPredicted RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 GPR62Q9BZJ7 368 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 NAT10Q9H0A0 1025 aaKnown RBP17.98■□□□□ 0.47
UBC-208ENST00000540700 S1PR5Q9H228 398 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 SPG21Q9NZD8 308 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 ITGA11Q9UKX5 1188 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 PLXNA4Q9HCM2 1894 aa17.98■□□□□ 0.47
UBC-208ENST00000540700 XPOTO43592 962 aaKnown RBP17.97■□□□□ 0.47
UBC-208ENST00000540700 B3GAT3O94766 335 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 TNNC2P02585 160 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 SRGAP2BP0DMP2 458 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 AARSP49588 968 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBC-208ENST00000540700 PLCB3Q01970 1234 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 KCNH2Q12809 1159 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 CREBRFQ8IUR6 639 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 DDX27Q96GQ7 796 aaKnown RBP17.97■□□□□ 0.47
UBC-208ENST00000540700 B3GALT6Q96L58 329 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 XYLT2Q9H1B5 865 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 TMEM8AQ9HCN3 771 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.97■□□□□ 0.478e-9■■■■■ 41.3
UBC-208ENST00000540700 TAB2Q9NYJ8 693 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 CDH22Q9UJ99 828 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 ADAM28Q9UKQ2 775 aa17.97■□□□□ 0.47
UBC-208ENST00000540700 HLA-DRAP01903 254 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 KRT19P08727 400 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 GTF2H1P32780 548 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 FMO5P49326 533 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 LILRA4P59901 499 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 MYL6P60660 151 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 BIRC3Q13489 604 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 KRT31Q15323 416 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 FUT10Q6P4F1 479 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 SYCE2Q6PIF2 218 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 COLEC11Q9BWP8 271 aa17.96■□□□□ 0.47
UBC-208ENST00000540700 SCN1AP35498 2009 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 PRR23AA6NEV1 266 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 PROB1E7EW31 1015 aa17.95■□□□□ 0.46
UBC-208ENST00000540700 FSCN2O14926 492 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms