RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PI15O43692 258 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 RFX1P22670 979 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 PLD1Q13393 1074 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 CYP4A22Q5TCH4 519 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 PHLDB3Q6NSJ2 640 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 CNNM4Q6P4Q7 775 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 STXBP4Q6ZWJ1 553 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 LEMD2Q8NC56 503 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 ATOH1Q92858 354 aaPredicted RBP22.67■■□□□ 1.22
CHFR-217ENST00000540537 DHX58Q96C10 678 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 SAAL1Q96ER3 474 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 MCRS1Q96EZ8 462 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 PHOX2BQ99453 314 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 KXD1Q9BQD3 176 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 TBC1D17Q9HA65 648 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 MAGEF1Q9HAY2 307 aa22.67■■□□□ 1.22
CHFR-217ENST00000540537 H0Y858 1186 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 STK25O00506 426 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 ECI2O75521 394 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 PRPF6O94906 941 aaKnown RBP22.66■■□□□ 1.22
CHFR-217ENST00000540537 EPHA5P54756 1037 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 GPC5P78333 572 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 ARMCX5Q6P1M9 558 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 CCDC105Q8IYK2 499 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 ZSWIM2Q8NEG5 633 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 TCEAL4Q96EI5 215 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 PGLYRP2Q96PD5 576 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 CBWD1Q9BRT8 395 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 ASAH2Q9NR71 780 aa22.66■■□□□ 1.22
CHFR-217ENST00000540537 MTMR11A4FU01 709 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 CYB561D2O14569 222 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 KIAA0391O15091 583 aaKnown RBP22.65■■□□□ 1.22
CHFR-217ENST00000540537 EXTL3O43909 919 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 CCR2P41597 374 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 DUSP4Q13115 394 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 FOXD4L6Q3SYB3 417 aaPredicted RBP22.65■■□□□ 1.22
CHFR-217ENST00000540537 CENPPQ6IPU0 288 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 POTEHQ6S545 545 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 FOXD4L3Q6VB84 417 aaPredicted RBP22.65■■□□□ 1.22
CHFR-217ENST00000540537 ZNF560Q96MR9 790 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 PYM1Q9BRP8 204 aaKnown RBP22.65■■□□□ 1.22
CHFR-217ENST00000540537 RBAKQ9NYW8 714 aaPredicted RBP22.65■■□□□ 1.22
CHFR-217ENST00000540537 HSFX1Q9UBD0 423 aa22.65■■□□□ 1.22
CHFR-217ENST00000540537 PNPLA4P41247 253 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 WNT7BP56706 349 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 ASIC1P78348 528 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 PFKPQ01813 784 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 SV2CQ496J9 727 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 METTL23Q86XA0 190 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 HS6ST3Q8IZP7 471 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 DTWD2Q8NBA8 298 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 OR10T2Q8NGX3 314 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 CACTINQ8WUQ7 758 aaKnown RBP22.64■■□□□ 1.21
CHFR-217ENST00000540537 BORCS6Q96GS4 357 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 SHDQ96IW2 340 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 TMEM209Q96SK2 561 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 C7orf25Q9BPX7 421 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 CRISPLD1Q9H336 500 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 FAM86C1Q9NVL1 165 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 CFAP45Q9UL16 551 aa22.64■■□□□ 1.21
CHFR-217ENST00000540537 GOLGA8IPA6NC78 632 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 GOLGA8JA6NMD2 632 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 KPNA7A9QM74 516 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 EIF3DO15371 548 aaKnown RBP eCLIP22.63■■□□□ 1.21
CHFR-217ENST00000540537 MOSPD3O75425 235 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 ALDH1A3P47895 512 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 ME1P48163 572 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 EPHB3P54753 998 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 STARD6P59095 220 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 TFAMQ00059 246 aaKnown RBP22.63■■□□□ 1.21
CHFR-217ENST00000540537 PKP1Q13835 747 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 GPD1LQ8N335 351 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 ATAD1Q8NBU5 361 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 GLIS3Q8NEA6 775 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 ELSPBP1Q96BH3 223 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 DNAJC25Q9H1X3 360 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 PCIF1Q9H4Z3 704 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 PCDHA7Q9UN72 937 aa22.63■■□□□ 1.21
CHFR-217ENST00000540537 NRG2O14511 850 aaPredicted RBP22.62■■□□□ 1.21
CHFR-217ENST00000540537 POLR2DO15514 142 aaKnown RBP22.62■■□□□ 1.21
CHFR-217ENST00000540537 MYL4P12829 197 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 FCARP24071 287 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 PRKCQQ04759 706 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 SMARCB1Q12824 385 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 TANGO2Q6ICL3 276 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 THEM5Q8N1Q8 247 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 C1orf127Q8N9H9 656 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 HPS3Q969F9 1004 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 ASB16Q96NS5 453 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 ZCWPW1Q9H0M4 648 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 FAM13BQ9NYF5 915 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 ASB3Q9Y575 518 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
CHFR-217ENST00000540537 POLR2BP30876 1174 aaKnown RBP22.61■■□□□ 1.21
CHFR-217ENST00000540537 MLF2Q15773 248 aaPredicted RBP22.61■■□□□ 1.21
CHFR-217ENST00000540537 SLC39A12Q504Y0 691 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 SLC44A4Q53GD3 710 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 FAM78AQ5JUQ0 283 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 FAM26FQ5R3K3 315 aa22.61■■□□□ 1.21
CHFR-217ENST00000540537 RESP18Q5W5W9 173 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms