RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PRR14Q9BWN1 585 aa9.74□□□□□ -0.85
TRAPPC1-202ENST00000540486 DUSP15Q9H1R2 295 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-202ENST00000540486 CCDC86Q9H6F5 360 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-202ENST00000540486 C2orf42Q9NWW7 574 aa9.74□□□□□ -0.85
TRAPPC1-202ENST00000540486 CLIC4Q9Y696 253 aa9.74□□□□□ -0.85
TRAPPC1-202ENST00000540486 PCNX2A6NKB5 2137 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 PP2D1A8MPX8 630 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 F8W810 466 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 ZNF197O14709 1029 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 DKC1O60832 514 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 ATG13O75143 517 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 TADA2AO75478 443 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 XRCC6P12956 609 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 ITGA4P13612 1032 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 CD46P15529 392 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 RPA1P27694 616 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 SIM1P81133 766 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 GRIN1Q05586 938 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 CCINQ13939 588 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 RAB33AQ14088 237 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 KARSQ15046 597 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 SLC5A9Q2M3M2 681 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 RTP2Q5QGT7 225 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 VITQ6UXI7 678 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 RALGPS2Q86X27 583 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 MFSD6LQ8IWD5 586 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 LNX1Q8TBB1 728 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 PIGOQ8TEQ8 1089 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 SMARCD2Q92925 531 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 E2F7Q96AV8 911 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 CEP170P1Q96L14 293 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 ZDHHC9Q9Y397 364 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 RAI2Q9Y5P3 530 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 ACACAQ13085 2346 aa9.73□□□□□ -0.85
TRAPPC1-202ENST00000540486 MYBPHLA2RUH7 354 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 UPK3BL1B0FP48 263 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 UPK3BL2E5RIL1 263 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 ARNTLO00327 626 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 EXTL3O43909 919 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 CEBPBP17676 345 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 HOXC13P31276 330 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 PXNP49023 591 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 RARRES1P49788 294 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 KPNA1P52294 538 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 CEBPZQ03701 1054 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 PSMD5Q16401 504 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 ZNF423Q2M1K9 1284 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 UAP1L1Q3KQV9 507 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 XKR9Q5GH70 373 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 WDR44Q5JSH3 913 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 UBXN11Q5T124 520 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 FOXD4L5Q5VV16 416 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 ARL6IP4Q66PJ3 421 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 OTUD6AQ7L8S5 288 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 RAB44Q7Z6P3 723 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 RHPN2Q8IUC4 686 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 CHCHD4Q8N4Q1 142 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 LSM14AQ8ND56 463 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 FAM200AQ8TCP9 573 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 FOXD4L4Q8WXT5 416 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 USP28Q96RU2 1077 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 GAD1Q99259 594 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 TRPV4Q9HBA0 871 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 XPNPEP1Q9NQW7 623 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 ANKEF1Q9NU02 776 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 MIOSQ9NXC5 875 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 SLC8A2Q9UPR5 921 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 MYO18BQ8IUG5 2567 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 SF3B1O75533 1304 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 SPTA1P02549 2419 aa9.72□□□□□ -0.85
TRAPPC1-202ENST00000540486 WDR27A2RRH5 827 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 CHADO15335 359 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 F13A1P00488 732 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 ZSCAN22P10073 491 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 PRKCSHP14314 528 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 MUTP22033 750 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 HOXA11P31270 313 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 SCNN1GP51170 649 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 LMAN2Q12907 356 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 ELAVL2Q12926 359 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 PRSS36Q5K4E3 855 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 SRGAP1Q7Z6B7 1085 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 PIP4P1Q86T03 277 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 C11orf74Q86VG3 221 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 KSR1Q8IVT5 923 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 SMG8Q8ND04 991 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 ERMNQ8TAM6 284 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 TMEM143Q96AN5 459 aa9.71□□□□□ -0.86
TRAPPC1-202ENST00000540486 PNMA5Q96PV4 448 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms