RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 PROZP22891 400 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 MCM7P33993 719 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 TNK2Q07912 1038 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 GPR17Q13304 367 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 RNF43Q68DV7 783 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 PSAPL1Q6NUJ1 521 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 PKN3Q6P5Z2 889 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 GAREM2Q75VX8 874 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 DNAJB7Q7Z6W7 309 aaPredicted RBP12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 BPIFB1Q8TDL5 484 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 PGLYRP2Q96PD5 576 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 TMEM209Q96SK2 561 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 TARS2Q9BW92 718 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 ATXN3LQ9H3M9 355 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 THG1LQ9NWX6 298 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 ZMIZ1Q9ULJ6 1067 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 SLC8A2Q9UPR5 921 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 SPAG17Q6Q759 2223 aa12.69□□□□□ -0.38
CLSTN3-209ENST00000539982 OR6C75A6NL08 312 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 ABLIM1O14639 778 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 OR4Q2P0C623 313 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 MPLP40238 635 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 NPTX2P47972 431 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 PEX3P56589 373 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 ECM1Q16610 540 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 SLC10A6Q3KNW5 377 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 ARHGAP15Q53QZ3 475 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 UNQ6494/PRO21346Q6UXR6 183 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 CAMKK1Q8N5S9 505 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 PSMG2Q969U7 264 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 SMOC1Q9H4F8 434 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
CLSTN3-209ENST00000539982 ZZEF1O43149 2961 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 GABRR2P28476 465 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 GRSF1Q12849 480 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 TRIM29Q14134 588 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 PLK5Q496M5 336 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 USP37Q86T82 979 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 ITIH5Q86UX2 942 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 DUSP15Q9H1R2 295 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 GKN1Q9NS71 199 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 HSFX1Q9UBD0 423 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
CLSTN3-209ENST00000539982 CITO14578 2027 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 TRDMT1O14717 391 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 RHOBTB1O94844 696 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 PRAMEF12O95522 483 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 OR52Z1P0C646 297 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 LRPAP1P30533 357 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 CCT6AP40227 531 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 AARSP49588 968 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 MCM2P49736 904 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 ORC2Q13416 577 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 ZNF174Q15697 407 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 NECAB1Q8N987 351 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 ATAD1Q8NBU5 361 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 ZBTB45Q96K62 511 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 FAM83CQ9BQN1 747 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 PLEKHA5Q9HAU0 1116 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 WASF3Q9UPY6 502 aa12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-209ENST00000539982 LAMA1P25391 3075 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 MTMR11A4FU01 709 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 C4orf47A7E2U8 309 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 GIPC1O14908 333 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 HIP1RO75146 1068 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 TOM1L1O75674 476 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 AMPD2Q01433 879 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 FOXC1Q12948 553 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 RUNX3Q13761 415 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 ELF2Q15723 593 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 SEZ6Q53EL9 994 aa12.65□□□□□ -0.38
CLSTN3-209ENST00000539982 DAB2IPQ5VWQ8 1189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms