RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RGS16O15492 202 aaPredicted RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 DAPK3O43293 454 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SNX3O60493 162 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 CCNT1O60563 726 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 BUB1BO60566 1050 aaPredicted RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 ZBED4O75132 1171 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SUN1O94901 812 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 GJB6O95452 261 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 OAS1P00973 400 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 CD4P01730 458 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 ASGR1P07306 291 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 TMEM253P0C7T8 217 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 CYP2D6P10635 497 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 RARGP13631 454 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 ATP5DP30049 168 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 TECP42680 631 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 PMS2P54278 862 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 TFAP4Q01664 338 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 KLRC3Q07444 240 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 BLMHQ13867 455 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 TRADDQ15628 312 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 CALCRLQ16602 461 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 AAK1Q2M2I8 961 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 PARP6Q2NL67 630 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 FAM26FQ5R3K3 315 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 DENND2CQ68D51 928 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 CDCA2Q69YH5 1023 aaPredicted RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SNRNP48Q6IEG0 339 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 TRMT10CQ7L0Y3 403 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 C16orf59Q7L2K0 433 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 DPH6Q7L8W6 267 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 FAM126BQ8IXS8 530 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SAAL1Q96ER3 474 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 ADAM7Q9H2U9 754 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 KCTD10Q9H3F6 313 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 MKNK2Q9HBH9 465 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SLC38A10Q9HBR0 1119 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 IL23AQ9NPF7 189 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 IL17RBQ9NRM6 502 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 INTS9Q9NV88 658 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 FBXO28Q9NVF7 368 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 VTI1BQ9UEU0 232 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 MTRF1LQ9UGC7 380 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 Q9Y3F1 56 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 NOC2LQ9Y3T9 749 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 USP15Q9Y4E8 981 aaPredicted RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 NCANO14594 1321 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 CHD9Q3L8U1 2897 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 KLHL33A6NCF5 533 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 KLRF2D3W0D1 207 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 PDXKO00764 312 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ADAMTS3O15072 1205 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CYTH3O43739 400 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 NEBLO76041 1014 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 AFPP02771 609 aaKnown RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 PFKMP08237 780 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 MMEP08473 750 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 C6orf222P0C671 652 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ALAS1P13196 640 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CHN1P15882 459 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 POU3F3P20264 500 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 RPL13P26373 211 aaKnown RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CHRNA3P32297 505 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 GCKP35557 465 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 SLC19A1P41440 591 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 NAPAP54920 295 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 JAM2P57087 298 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 COASYQ13057 564 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 RAPGEF1Q13905 1077 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 NAA25Q14CX7 972 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 LETM2Q2VYF4 491 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 PARP14Q460N5 1801 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 GNASQ5JWF2 1037 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 BZW1Q7L1Q6 419 aaKnown RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CYFIP1Q7L576 1253 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ZNF571Q7Z3V5 609 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CYP2U1Q7Z449 544 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 HEATR3Q7Z4Q2 680 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 CLEC10AQ8IUN9 316 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 SPNS2Q8IVW8 549 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ZNF444Q8N0Y2 327 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 REXO1Q8N1G1 1221 aaKnown RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 GMCL1P1Q8NEA9 526 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 SLC30A5Q8TAD4 765 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 ATP8B4Q8TF62 1192 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 NSMCE1Q8WV22 266 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 MKL1Q969V6 931 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 SERPINB12Q96P63 405 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 TMEM237Q96Q45 408 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 RAB3IPQ96QF0 476 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-204ENST00000539847 RPS6KC1Q96S38 1066 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 C1QTNF1Q9BXJ1 281 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 TRIM7Q9C029 511 aa8.16□□□□□ -1.1
CCDC60-204ENST00000539847 NEUROG2Q9H2A3 272 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms