RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 GDAP2Q9NXN4 497 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 FNIP2Q9P278 1114 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 MTRRQ9UBK8 725 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 L1RE1Q9UN81 338 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 MYO7AQ13402 2215 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 H7C4K7 107 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 TBC1D4O60343 1298 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 STX10O60499 249 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 LRRN2O75325 713 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 STAU1O95793 577 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 CYP11A1P05108 521 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 KLRC2P26717 231 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 ATICP31939 592 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 MXI1P50539 228 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 CREMQ03060 361 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 YWHAHQ04917 246 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 HSP90AA4PQ58FG1 418 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 WSCD1Q658N2 575 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 KRT39Q6A163 491 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 LLGL2Q6P1M3 1020 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 VN1R2Q8NFZ6 395 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 SLC22A17Q8WUG5 538 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 CDCA3Q99618 268 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 SAMSN1Q9NSI8 373 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 POLIQ9UNA4 740 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 NFE2L3Q9Y4A8 694 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 BACE2Q9Y5Z0 518 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
TSPAN9-207ENST00000539631 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 HUS1O60921 280 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 CLSTN1O94985 981 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 OAZ2O95190 189 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 GLP2RO95838 553 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 ADH1AP07327 375 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 EPCAMP16422 314 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 OR1D2P34982 312 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 FMO5P49326 533 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 NDUFV1P49821 464 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 CLCN4P51793 760 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 ADAM15Q13444 863 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 KCNC3Q14003 757 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 SGSM1Q2NKQ1 1148 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 WDR72Q3MJ13 1102 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 CTXN3Q4LDR2 81 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 EP400NLQ6ZTU2 488 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 METTL23Q86XA0 190 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 PALB2Q86YC2 1186 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 EFHBQ8N7U6 833 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 VRTNQ9H8Y1 702 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 CLDND1Q9NY35 253 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 FBXL5Q9UKA1 691 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 DSEQ9UL01 958 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 HCFC2Q9Y5Z7 792 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
TSPAN9-207ENST00000539631 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 AFPP02771 609 aaKnown RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 MTIF2P46199 727 aaKnown RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 ARPP19P56211 112 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 TNNC1P63316 161 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 MYL7Q01449 175 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 DLX2Q07687 328 aaPredicted RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 KCNH2Q12809 1159 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 COL19A1Q14993 1142 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 SOWAHAQ2M3V2 549 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 CTC1Q2NKJ3 1217 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 LIMS2Q7Z4I7 341 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 PPFIBP1Q86W92 1011 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 OSTM1Q86WC4 334 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 PABPC5Q96DU9 382 aaKnown RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 TMEM209Q96SK2 561 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 MMS19Q96T76 1030 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 RTP3Q9BQQ7 232 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 APOBEC3GQ9HC16 384 aaKnown RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 RAB20Q9NX57 234 aa13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 MAGEC2Q9UBF1 373 aaPredicted RBP13.64□□□□□ -0.23
TSPAN9-207ENST00000539631 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.63□□□□□ -0.23
TSPAN9-207ENST00000539631 KCNJ18B7U540 433 aa13.63□□□□□ -0.23
TSPAN9-207ENST00000539631 TGM5O43548 720 aa13.63□□□□□ -0.23
TSPAN9-207ENST00000539631 NCK2O43639 380 aa13.63□□□□□ -0.23
TSPAN9-207ENST00000539631 TBX10O75333 385 aa13.63□□□□□ -0.23
TSPAN9-207ENST00000539631 GLUD1P00367 558 aa13.63□□□□□ -0.23
TSPAN9-207ENST00000539631 OR4Q2P0C623 313 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms