RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PORCNQ9H237 461 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 ACAD9Q9H845 621 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 SAYSD1Q9NPB0 183 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 AVENQ9NQS1 362 aaPredicted RBP14.91□□□□□ -0.02
UBE3B-210ENST00000539599 SAMD15Q9P1V8 674 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 PIM2Q9P1W9 311 aa14.91□□□□□ -0.02
UBE3B-210ENST00000539599 UBA1P22314 1058 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 CGB2Q6NT52 195 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 CEP57Q86XR8 500 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 TMEM192Q8IY95 271 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 SLC17A8Q8NDX2 589 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 RBM15Q96T37 977 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 TEX13BQ9BXU2 312 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 C12orf65Q9H3J6 166 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 ZNF148Q9UQR1 794 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 KCNJ2P63252 427 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 NFX1Q12986 1120 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 ANKMY2Q8IV38 441 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 C4orf33Q8N1A6 199 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 SLC7A3Q8WY07 619 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 TBC1D31Q96DN5 1066 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 RMDN2Q96LZ7 410 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 TRAIPQ9BWF2 469 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 C17orf75Q9HAS0 396 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 MAP3K20Q9NYL2 800 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 POLIQ9UNA4 740 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 LCTP09848 1927 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 A0A0B4J269 797 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 A8MUI8 341 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 B4GALT5O43286 388 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 SNX3O60493 162 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 ZNF280AP59817 542 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 CLDN10P78369 228 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 TFAMQ00059 246 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 EFTUD2Q15029 972 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■□□ 17.4
UBE3B-210ENST00000539599 MFSD5Q6N075 450 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 PNMA8AQ86V59 439 aaPredicted RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 THNSL1Q8IYQ7 743 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 EMC1Q8N766 993 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 FEZF2Q8TBJ5 459 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 LRRN4Q8WUT4 740 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 PRPF31Q8WWY3 499 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 RUNDC3BQ96NL0 473 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 PLVAPQ9BX97 442 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 DHX33Q9H6R0 707 aaKnown RBP14.9□□□□□ -0.02
UBE3B-210ENST00000539599 ZWILCHQ9H900 591 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 GGA2Q9UJY4 613 aa14.9□□□□□ -0.02
UBE3B-210ENST00000539599 KLRC2P26717 231 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 FOXN2P32314 431 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 ARSEP51690 589 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 CDH8P55286 799 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 PLCB3Q01970 1234 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 GPS1Q13098 491 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 LIN9Q5TKA1 542 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 PLEKHA7Q6IQ23 1121 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 GPAT2Q6NUI2 795 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 TAOK1Q7L7X3 1001 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 TRPM8Q7Z2W7 1104 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 WDTC1Q8N5D0 677 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-210ENST00000539599 SLCO2A1Q92959 643 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 TMEM109Q9BVC6 243 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 NXF1Q9UBU9 619 aaKnown RBP14.89□□□□□ -0.03
UBE3B-210ENST00000539599 PHIPQ8WWQ0 1821 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 LRRD1A4D1F6 860 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 CD48P09326 243 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 PECAM1P16284 738 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-210ENST00000539599 GCAP28676 217 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 ARL2P36404 184 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 GDF10P55107 478 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 MCCD1P59942 119 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-210ENST00000539599 TGFB2P61812 414 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 MGAT5Q09328 741 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 TAF5Q15542 800 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 RAB6CQ53S08 254 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 POTEAQ6S8J7 498 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 CATSPERGQ6ZRH7 1159 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 ENOSF1Q7L5Y1 443 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 DPH6Q7L8W6 267 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 PARP9Q8IXQ6 854 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 RDM1Q8NG50 284 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 SLITRK1Q96PX8 696 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 CGRRF1Q99675 332 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 RAB6CQ9H0N0 254 aa14.89□□□□□ -0.03
UBE3B-210ENST00000539599 MAFBQ9Y5Q3 323 aaPredicted RBP14.89□□□□□ -0.03
UBE3B-210ENST00000539599 PGK2P07205 417 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
UBE3B-210ENST00000539599 GBP1P32455 592 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 SLC1A1P43005 524 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 MAGEA4P43358 317 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 GNPTABQ3T906 1256 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 DALRD3Q5D0E6 543 aaKnown RBP14.88□□□□□ -0.03
UBE3B-210ENST00000539599 DCUN1D2Q6PH85 259 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 C3orf20Q8ND61 904 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 PRCCQ92733 491 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-210ENST00000539599 TGS1Q96RS0 853 aaKnown RBP14.88□□□□□ -0.03
UBE3B-210ENST00000539599 BTBD7Q9P203 1132 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 CYTH4Q9UIA0 394 aa14.88□□□□□ -0.03
UBE3B-210ENST00000539599 ADGRA2Q96PE1 1338 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms