RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 C3orf62Q6ZUJ4 267 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 EFL1Q7Z2Z2 1120 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 HPS3Q969F9 1004 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ABTB1Q969K4 478 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 TMEM117Q9H0C3 514 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 MTO1Q9Y2Z2 717 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GPR75-ASB3A0A0A6YYF3 556 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 POLRMTO00411 1230 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 APOA4P06727 396 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ATXN8OSP0DMR3 200 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CNGA3Q16281 694 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GPRC5AQ8NFJ5 357 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SPATA18Q8TC71 538 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 HPDLQ96IR7 371 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 RMDN2Q96LZ7 410 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ZC3H7BQ9UGR2 993 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GRID1Q9ULK0 1009 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 FAM200BP0CF97 657 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GYS2P54840 703 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 DYNC1I2Q13409 638 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 LRRC14Q15048 493 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 TAF1CQ15572 869 aaPredicted RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GOLGA7BQ2TAP0 167 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PKN3Q6P5Z2 889 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 SHCBP1Q8NEM2 672 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GFM2Q969S9 779 aaKnown RBP6.79□□□□□ -1.32
LSAMP-207ENST00000539563 VPS33BQ9H267 617 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 GID8Q9NWU2 228 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 PSD3Q9NYI0 1048 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 TUBE1Q9UJT0 475 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 CDYLQ9Y232 598 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 ZDHHC9Q9Y397 364 aa6.79□□□□□ -1.32
LSAMP-207ENST00000539563 FAM47DPA6NHR8 397 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 H0Y3Z8 333 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 RGS7P49802 495 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 NPEPPSP55786 919 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 FOXD4Q12950 439 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 STAMBPL1Q96FJ0 436 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 C20orf96Q9NUD7 363 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 AGPAT5Q9NUQ2 364 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 A0A0G2JLW4 131 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 GTPBP10A4D1E9 387 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 DYNC1LI2O43237 492 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 KDM1AO60341 852 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 FDFT1P37268 417 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 FMR1Q06787 632 aaKnown RBP eCLIP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 USP10Q14694 798 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 AASDHQ4L235 1098 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CD302Q8IX05 232 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ANKRD13AQ8IZ07 590 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TAGAPQ8N103 731 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TFB1MQ8WVM0 346 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF556Q9HAH1 456 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CYP4F11Q9HBI6 524 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 KIAA1257Q9ULG3 409 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 VPS9D1Q9Y2B5 631 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 NR3C2P08235 984 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 SNRPAP09012 282 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF157P51786 506 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ATP6V0D2Q8N8Y2 350 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 GPRASP2Q96D09 838 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ATXN7L3BQ96GX2 97 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TMEM106CQ9BVX2 250 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 JMJD4Q9H9V9 463 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 LRRIQ3A6PVS8 624 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 H0Y626 953 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TRIM16O95361 564 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ASMTLO95671 621 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ODC1P11926 461 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 RAD23BP54727 409 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CACNB2Q08289 660 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 MOXD1Q6UVY6 613 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CCNI2Q6ZMN8 369 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 AGBL3Q8NEM8 1001 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TBX20Q9UMR3 447 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CLCA2Q9UQC9 943 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 FAM32AQ9Y421 112 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 USP15Q9Y4E8 981 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 USP27XA6NNY8 438 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 VGLL3A8MV65 326 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ARHGEF9O43307 516 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TBC1D4O60343 1298 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 MTF1Q14872 753 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 TDRD10Q5VZ19 366 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 KCNK16Q96T55 309 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 SUFUQ9UMX1 484 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 PKP3Q9Y446 797 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CDY2AQ9Y6F7 541 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 CDY1Q9Y6F8 540 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 MAN1A2O60476 641 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 GNL1P36915 607 aaPredicted RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 DCAF6Q58WW2 860 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 PTRHD1Q6GMV3 140 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 SDE2Q6IQ49 451 aa6.78□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF473Q8WTR7 871 aaKnown RBP6.78□□□□□ -1.32
LSAMP-207ENST00000539563 NR1H4Q96RI1 486 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms