RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 JADE3Q92613 823 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 MVB12AQ96EY5 273 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 C1orf159Q96HA4 380 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 TMEM169Q96HH4 297 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 HIC2Q96JB3 615 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 ZC3H10Q96K80 434 aaKnown RBP4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 MPHOSPH8Q99549 860 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 B3GNT5Q9BYG0 378 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 PCED1AQ9H1Q7 454 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 GPRC5CQ9NQ84 441 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 ZNF277Q9NRM2 450 aaPredicted RBP4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 VPS45Q9NRW7 570 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 CCM2LQ9NUG4 571 aaPredicted RBP4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 OXSMQ9NWU1 459 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 ERVK13-1Q9NX77 482 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 CLEC1BQ9P126 229 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 C11orf21Q9P2W6 132 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 SEL1LQ9UBV2 794 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 PCDHA2Q9Y5H9 948 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 PXDNLA1KZ92 1463 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 GOLGA3Q08378 1498 aa4.3□□□□□ -1.72
AC055720.1-201ENST00000539552 GPRASP1Q5JY77 1395 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 A0A087X0M5 115 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 A0A1B0GX30 115 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 A6NLC8 198 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 RHPN2P1A8MT19 583 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 CPLX1O14810 134 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 AURKAO14965 403 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 KPNA5O15131 536 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 NCK2O43639 380 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 HTATSF1O43719 755 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 AHCYL1O43865 530 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ZBED4O75132 1171 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 DNTTP04053 509 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 MTHFD1P11586 935 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 MYCLP12524 364 aaPredicted RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 PLS3P13797 630 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ATF2P15336 505 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 XBP1P17861 261 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 MUTP22033 750 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 LIFRP42702 1097 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 MECP2P51608 486 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 MAPK10P53779 464 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 DRG2P55039 364 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 RPL11P62913 178 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 MVKQ03426 396 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 FAM209BQ5JX69 171 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 FAM205BPQ63HN1 556 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 FRMD7Q6ZUT3 714 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 RTL10Q7L3V2 364 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 DAAM2Q86T65 1068 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 CABP7Q86V35 215 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ZNF761Q86XN6 746 aaPredicted RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 UNC5CLQ8IV45 518 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ZNF527Q8NB42 609 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ZMIZ2Q8NF64 920 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 OR8H1Q8NGG4 311 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 SSH3Q8TE77 659 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 IPCEF1Q8WWN9 437 aaPredicted RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 LRTOMTQ8WZ04 291 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 COPS5Q92905 334 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 PHKBQ93100 1093 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 FAM122AQ96E09 287 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ACAP3Q96P50 834 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 BAG1Q99933 345 aaPredicted RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 CCDC68Q9H2F9 335 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 DEF6Q9H4E7 631 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 PLSCR4Q9NRQ2 329 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 OLA1Q9NTK5 396 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 GGA3Q9NZ52 723 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 CFDP1Q9UEE9 299 aaPredicted RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 NALCNQ8IZF0 1738 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 USP34Q70CQ2 3546 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 ZNF292O60281 2723 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 TOPAZ1Q8N9V7 1692 aa4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 TNRC6CQ9HCJ0 1690 aaKnown RBP4.29□□□□□ -1.72
AC055720.1-201ENST00000539552 THSD7BQ9C0I4 1608 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 INO80Q9ULG1 1556 aaPredicted RBP4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 CAPN8A6NHC0 703 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 FOXN3O00409 490 aaPredicted RBP4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 P4HA2O15460 535 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 FFAR2O15552 330 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 SRGAP3O43295 1099 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 TMEM127O75204 238 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 MAFO75444 373 aaPredicted RBP4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 SKAP2O75563 359 aaPredicted RBP4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 AMHP03971 560 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 DBHP09172 617 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 GSTM1P09488 218 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 GNAT1P11488 350 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 AKR1B1P15121 316 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 KCNA2P16389 499 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 KRT15P19012 456 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 CD40P25942 277 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 PDIA3P30101 505 aaKnown RBP4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 NPTX2P47972 431 aa4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 PAPOLAP51003 745 aaKnown RBP4.28□□□□□ -1.72
AC055720.1-201ENST00000539552 AGFG1P52594 562 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms