RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 AGPAT1Q99943 283 aa20.47■□□□□ 0.87
TRPT1-207ENST00000539436 DDX3XO00571 662 aaKnown RBP eCLIP20.46■□□□□ 0.877e-16■■■■□ 21
TRPT1-207ENST00000539436 TNFAIP3P21580 790 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 PNPLA4P41247 253 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 UPP1Q16831 310 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 SV2CQ496J9 727 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 PAN2Q504Q3 1202 aaKnown RBP20.46■□□□□ 0.87
TRPT1-207ENST00000539436 DNAAF5Q86Y56 855 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
TRPT1-207ENST00000539436 ABI1Q8IZP0 508 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 LNX1Q8TBB1 728 aaPredicted RBP20.46■□□□□ 0.87
TRPT1-207ENST00000539436 FAXDC2Q96IV6 333 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 CASD1Q96PB1 797 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 MRPL45Q9BRJ2 306 aaKnown RBP20.46■□□□□ 0.87
TRPT1-207ENST00000539436 SYT11Q9BT88 431 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 CYP3A43Q9HB55 503 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 SEPT11Q9NVA2 429 aaKnown RBP20.46■□□□□ 0.87
TRPT1-207ENST00000539436 TBC1D13Q9NVG8 400 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 PRKAG2Q9UGJ0 569 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 HMGXB4Q9UGU5 601 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 NOCTQ9UK39 431 aaKnown RBP20.46■□□□□ 0.87
TRPT1-207ENST00000539436 TFR2Q9UP52 801 aa20.46■□□□□ 0.87
TRPT1-207ENST00000539436 MMEP08473 750 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 CCDC175P0C221 793 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 CHRNB2P17787 502 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 SSTR3P32745 418 aaPredicted RBP20.45■□□□□ 0.86
TRPT1-207ENST00000539436 PDE6CP51160 858 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 YWHAEP62258 255 aaKnown RBP20.45■□□□□ 0.86
TRPT1-207ENST00000539436 RNASELQ05823 741 aaKnown RBP20.45■□□□□ 0.86
TRPT1-207ENST00000539436 SOWAHAQ2M3V2 549 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 COL13A1Q5TAT6 717 aaPredicted RBP20.45■□□□□ 0.86
TRPT1-207ENST00000539436 FAM43BQ6ZT52 329 aaPredicted RBP20.45■□□□□ 0.86
TRPT1-207ENST00000539436 NPAS4Q8IUM7 802 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 BADQ92934 168 aa20.45■□□□□ 0.86
TRPT1-207ENST00000539436 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.86
TRPT1-207ENST00000539436 RPL9P32969 192 aaKnown RBP20.44■□□□□ 0.86
TRPT1-207ENST00000539436 ZNF132P52740 706 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 SLC18A3Q16572 532 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 TMCO2Q7Z6W1 182 aaPredicted RBP20.44■□□□□ 0.86
TRPT1-207ENST00000539436 REXO1L1PQ8IX06 675 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 WHAMMQ8TF30 809 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 HASPINQ8TF76 798 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 TWNKQ96RR1 684 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 GDAP2Q9NXN4 497 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 SCN1AP35498 2009 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 TBKBP1A7MCY6 615 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 F8W810 466 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 SYN1P17600 705 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 GNA15P30679 374 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 SPA17Q15506 151 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 PALB2Q86YC2 1186 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 SLC30A5Q8TAD4 765 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 DDX1Q92499 740 aaKnown RBP20.44■□□□□ 0.86
TRPT1-207ENST00000539436 PPP1R13BQ96KQ4 1090 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 ELOVL4Q9GZR5 314 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 KANSL3Q9P2N6 904 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 HCSTQ9UBK5 93 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 DNAJB4Q9UDY4 337 aa20.44■□□□□ 0.86
TRPT1-207ENST00000539436 ABHD14A-ACY1A0A1B0GW23 586 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 CYB561D2O14569 222 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 CILPO75339 1184 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 B3GAT3O94766 335 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 IPO7O95373 1038 aaKnown RBP20.43■□□□□ 0.86
TRPT1-207ENST00000539436 LCA5LO95447 670 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 NDST1P52848 882 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 RAD23BP54727 409 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 BPIFB4P59827 614 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 KRT83P78385 493 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 DEFB103AP81534 67 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 BMS1Q14692 1282 aaKnown RBP20.43■□□□□ 0.86
TRPT1-207ENST00000539436 CCDC122Q5T0U0 273 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 C16orf59Q7L2K0 433 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 OTOP2Q7RTS6 562 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 VPS36Q86VN1 386 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 COLGALT2Q8IYK4 626 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 DDX27Q96GQ7 796 aaKnown RBP20.43■□□□□ 0.86
TRPT1-207ENST00000539436 FAM193BQ96PV7 902 aaPredicted RBP20.43■□□□□ 0.86
TRPT1-207ENST00000539436 PCDHB18PQ96TA0 734 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 IL23AQ9NPF7 189 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 L1RE1Q9UN81 338 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 PCDHA13Q9Y5I0 950 aa20.43■□□□□ 0.86
TRPT1-207ENST00000539436 TMCO5BA8MYB1 307 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 I3L4J1 428 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 ZSCAN12O43309 604 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 THAP12O43422 761 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 HCRTO43612 131 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 ABL1P00519 1130 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 ITGB1P05556 798 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 CFHP08603 1231 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 MAGEA1P43355 309 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 BRCC3P46736 316 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 OR1G1P47890 313 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 FMO1Q01740 532 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 CDR2Q01850 454 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 DSC1Q08554 894 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 FAM117BQ6P1L5 589 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 CD300LGQ6UXG3 332 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 DSTYKQ6XUX3 929 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 SLC4A11Q8NBS3 891 aa20.42■□□□□ 0.86
TRPT1-207ENST00000539436 APPL2Q8NEU8 664 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms