RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 TMEM117Q9H0C3 514 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 TMX1Q9H3N1 280 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 NXF3Q9H4D5 531 aaKnown RBP5.6□□□□□ -1.51
LINC02408-202ENST00000538573 ASB7Q9H672 318 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 RUBCNLQ9H714 662 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 TOPORSQ9NS56 1045 aaPredicted RBP5.6□□□□□ -1.51
LINC02408-202ENST00000538573 FAM207AQ9NSI2 230 aaPredicted RBP5.6□□□□□ -1.51
LINC02408-202ENST00000538573 FAM105AQ9NUU6 356 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 KLK14Q9P0G3 267 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 DOLKQ9UPQ8 538 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 IPPQ9Y573 584 aa5.6□□□□□ -1.51
LINC02408-202ENST00000538573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.6□□□□□ -1.51
LINC02408-202ENST00000538573 KIAA0100Q14667 2235 aaKnown RBP5.6□□□□□ -1.51
LINC02408-202ENST00000538573 PTPRJQ12913 1337 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 A0A0U1RQF3 1178 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TTC26A0AVF1 554 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 GTPBP10A4D1E9 387 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TRIM43BA6NCK2 446 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 CCDC85CA6NKD9 419 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PIK3R2O00459 728 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 RECQL4O94761 1208 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PARNO95453 639 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TIMP1P01033 207 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TNNC2P02585 160 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 C4BPAP04003 597 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 NFICP08651 508 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 KRT19P08727 400 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TPM1P09493 284 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TMEM191BP0C7N4 346 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 SKIP12755 728 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 ACTN1P12814 892 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TRIM21P19474 475 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 SLC9A1P19634 815 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PON1P27169 355 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 CASP14P31944 242 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PBX1P40424 430 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PIK3CAP42336 1068 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 MXI1P50539 228 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 AP3M2P53677 418 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 CLDN10P78369 228 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 POU5F1Q01860 360 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 APBA1Q02410 837 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 ENPEPQ07075 957 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 LRMPQ12912 555 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TRPC3Q13507 836 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 DSC3Q14574 896 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 GPNMBQ14956 572 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TMEM132DQ14C87 1099 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 DUOXA2Q1HG44 320 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PLEKHG4Q58EX7 1191 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 COL13A1Q5TAT6 717 aaPredicted RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 SLC24A5Q71RS6 500 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 CCDC186Q7Z3E2 898 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 RTN4RL1Q86UN2 441 aaPredicted RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 WDR49Q8IV35 697 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 GOLGA6L1Q8N7Z2 621 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 FBXL13Q8NEE6 735 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 OR5B17Q8NGF7 314 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 APBB2Q92870 758 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 LPPQ93052 612 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TRIM43Q96BQ3 446 aaPredicted RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PGBD4Q96DM1 585 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 ANKRD36BP1Q96IX9 119 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 NUP58Q9BVL2 599 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 FTHL17Q9BXU8 183 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 INTS2Q9H0H0 1204 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 WNT8AQ9H1J5 351 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 CXCL16Q9H2A7 254 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PLEKHA5Q9HAU0 1116 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TMEM8AQ9HCN3 771 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 RGS18Q9NS28 235 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 RNF19AQ9NV58 838 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 GCNT4Q9P109 453 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 IMPACTQ9P2X3 320 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 PRKAG2Q9UGJ0 569 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 TBX21Q9UL17 535 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 SIK3Q9Y2K2 1263 aa5.59□□□□□ -1.51
LINC02408-202ENST00000538573 R3HCC1Q9Y3T6 440 aaKnown RBP5.59□□□□□ -1.51
LINC02408-202ENST00000538573 HTTP42858 3142 aa5.59□□□□□ -1.52
LINC02408-202ENST00000538573 TANC1Q9C0D5 1861 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 CENPFP49454 3210 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 ITIH6Q6UXX5 1313 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 SMIM28A0A1B0GU29 152 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 MEIS3P2A8K0S8 358 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 C9IYK1 514 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 AKR1B15C9JRZ8 316 aaPredicted RBP5.58□□□□□ -1.52
LINC02408-202ENST00000538573 ENPP3O14638 875 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 KIAA0355O15063 1070 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 EPHB6O15197 1021 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 P4HA2O15460 535 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 MEFVO15553 781 aaPredicted RBP5.58□□□□□ -1.52
LINC02408-202ENST00000538573 RRP9O43818 475 aaKnown RBP5.58□□□□□ -1.52
LINC02408-202ENST00000538573 ZNF623O75123 536 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 LRRN2O75325 713 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 EOMESO95936 686 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
LINC02408-202ENST00000538573 HLA-DRAP01903 254 aa5.58□□□□□ -1.52
LINC02408-202ENST00000538573 CSF2RAP15509 400 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms