RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ASCC2Q9H1I8 757 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-204ENST00000538492 OTOFQ9HC10 1997 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 OGTO15294 1046 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 SYDE1Q6ZW31 735 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-204ENST00000538492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.41■■□□□ 1.827e-7■■■□□ 16.7
RAB40C-204ENST00000538492 ZBTB8OSQ8IWT0 167 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 CLMNQ96JQ2 1002 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 FAM167AQ96KS9 214 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 TMEM109Q9BVC6 243 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 ANAPC5Q9UJX4 755 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 KRT10P13645 584 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 DUOXA2Q1HG44 320 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 ZNF568Q3ZCX4 644 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 CDCA2Q69YH5 1023 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-204ENST00000538492 EXD1Q8NHP7 514 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 NLRP4Q96MN2 994 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 MCEEQ96PE7 176 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 TXNRD2Q9NNW7 524 aa26.41■■□□□ 1.82
RAB40C-204ENST00000538492 CNMDO75829 334 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 TRPC3Q13507 836 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 TMEM63BQ5T3F8 832 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 ZNF365Q70YC5 407 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 CPLX4Q7Z7G2 160 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 NIF3L1Q9GZT8 377 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 IP6K2Q9UHH9 426 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 PCNTO95613 3336 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 ATXN2Q99700 1313 aaKnown RBP26.4■■□□□ 1.82
RAB40C-204ENST00000538492 SOCS7O14512 581 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 AP3M2P53677 418 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 MXD4Q14582 209 aaPredicted RBP26.4■■□□□ 1.82
RAB40C-204ENST00000538492 CCNG2Q16589 344 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 KYNUQ16719 465 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 TTC31Q49AM3 519 aaPredicted RBP26.4■■□□□ 1.82
RAB40C-204ENST00000538492 CEP120Q8N960 986 aa26.4■■□□□ 1.82
RAB40C-204ENST00000538492 CPSF3Q9UKF6 684 aaKnown RBP26.4■■□□□ 1.82
RAB40C-204ENST00000538492 MCM3APO60318 1980 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 ABLIM1O14639 778 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 B4GALT5O43286 388 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 ZNF252P-AS1Q0IIN9 211 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 GPAT2Q6NUI2 795 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 MOB2Q70IA6 237 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 CROCCP2Q86T23 111 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 FBXO16Q8IX29 292 aaPredicted RBP26.39■■□□□ 1.82
RAB40C-204ENST00000538492 TCP11Q8WWU5 503 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 COPS5Q92905 334 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 TRAIPQ9BWF2 469 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 LRRC37A2A6NM11 1700 aa26.39■■□□□ 1.82
RAB40C-204ENST00000538492 TMEM191CA6NGB0 347 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 F8VP50 259 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 TMEM191BP0C7N4 346 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 ATF7P17544 494 aaPredicted RBP26.39■■□□□ 1.81
RAB40C-204ENST00000538492 MCL1Q07820 350 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 NFX1Q12986 1120 aaKnown RBP26.39■■□□□ 1.81
RAB40C-204ENST00000538492 TMEM132AQ24JP5 1023 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 SGSM1Q2NKQ1 1148 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 WDR78Q5VTH9 848 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 GSTA5Q7RTV2 222 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 ACSF2Q96CM8 615 aaPredicted RBP26.39■■□□□ 1.81
RAB40C-204ENST00000538492 SEC16BQ96JE7 1060 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 FGD4Q96M96 766 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 HOMER3Q9NSC5 361 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 NEU2Q9Y3R4 380 aa26.39■■□□□ 1.81
RAB40C-204ENST00000538492 INO80B-WBP1J3KQ70 363 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 CELF3Q5SZQ8 465 aaKnown RBP26.38■■□□□ 1.81
RAB40C-204ENST00000538492 DNAJC24Q6P3W2 148 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 DCUN1D2Q6PH85 259 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 SULF1Q8IWU6 871 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 C3orf20Q8ND61 904 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 ATXN2LQ8WWM7 1075 aaKnown RBP26.38■■□□□ 1.81
RAB40C-204ENST00000538492 TFAP2BQ92481 460 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 CENPTQ96BT3 561 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 SPATA33Q96N06 139 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 INO80BQ9C086 356 aaPredicted RBP26.38■■□□□ 1.81
RAB40C-204ENST00000538492 IVNS1ABPQ9Y6Y0 642 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 PAPPA2Q9BXP8 1791 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 A0A0G2JLL6 359 aaPredicted RBP26.38■■□□□ 1.81
RAB40C-204ENST00000538492 HOXC6P09630 235 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 OGDHQ02218 1023 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 PLCB4Q15147 1175 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 ZNF699Q32M78 642 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 Q3C1V9 767 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 CYP4A22Q5TCH4 519 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 C6orf89Q6UWU4 347 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 PRRT2Q7Z6L0 340 aaPredicted RBP26.38■■□□□ 1.81
RAB40C-204ENST00000538492 DCPSQ96C86 337 aaKnown RBP26.38■■□□□ 1.81
RAB40C-204ENST00000538492 CHMP6Q96FZ7 201 aa26.38■■□□□ 1.81
RAB40C-204ENST00000538492 PDE4CQ08493 712 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 GRM1Q13255 1194 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 TMEM130Q8N3G9 435 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 INTS9Q9NV88 658 aaKnown RBP26.37■■□□□ 1.81
RAB40C-204ENST00000538492 CTNNAL1Q9UBT7 734 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 NXF1Q9UBU9 619 aaKnown RBP26.37■■□□□ 1.81
RAB40C-204ENST00000538492 MGAMO43451 1857 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 TTC4O95801 387 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 CALB1P05937 261 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 DRD4P21917 467 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 TNFAIP8L3Q5GJ75 292 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 TXNRD3NBQ6F5E7 133 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 PPP1R2P3Q6NXS1 205 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 YTHDF3Q7Z739 585 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms