RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ZNF677Q86XU0 584 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 SLC25A41Q8N5S1 370 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 ICA1LQ8NDH6 482 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 RFWD2Q8NHY2 731 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 RUBCNQ92622 972 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 ALG13Q9NP73 1137 aaKnown RBP17.6■□□□□ 0.41
SCARB1-205ENST00000538291 SNX12Q9UMY4 172 aa17.6■□□□□ 0.41
SCARB1-205ENST00000538291 NCAM1P13591 858 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 SPRP35270 261 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-205ENST00000538291 DAB2P98082 770 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 LRRC74AQ0VAA2 488 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 TMEM161AQ9NX61 479 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 GOLGA8RI6L899 631 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 TASP1Q9H6P5 420 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 C20orf96Q9NUD7 363 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-205ENST00000538291 AURKCQ9UQB9 309 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 CATSPER3Q86XQ3 398 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 IPMKQ8NFU5 416 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.59■□□□□ 0.411e-10■■■■■ 60.3
SCARB1-205ENST00000538291 SLC2A3P11169 496 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 RPS6P62753 249 aaKnown RBP17.59■□□□□ 0.41
SCARB1-205ENST00000538291 BYSLQ13895 437 aaKnown RBP17.59■□□□□ 0.41
SCARB1-205ENST00000538291 OOSP2Q86WS3 158 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 ATP6V0D2Q8N8Y2 350 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
SCARB1-205ENST00000538291 SMAPO00193 183 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 CHGBP05060 677 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 THPOP40225 353 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 UBA3Q8TBC4 463 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 TARS2Q9BW92 718 aaKnown RBP17.58■□□□□ 0.41
SCARB1-205ENST00000538291 PPCSQ9HAB8 311 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 NEU2Q9Y3R4 380 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 ALKQ9UM73 1620 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 SPAG6O75602 509 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 POLBP06746 335 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 STK4Q13043 487 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 HS6ST3Q8IZP7 471 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 ECT2Q9H8V3 914 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 GIMAP4Q9NUV9 329 aa17.58■□□□□ 0.41
SCARB1-205ENST00000538291 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.58■□□□□ 0.41
SCARB1-205ENST00000538291 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 A0A1B0GTH6 734 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 SUPT3HB4E1H0 165 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 KRT16P08779 473 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 CYP2C8P10632 490 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF200P98182 395 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-205ENST00000538291 PRKCQQ04759 706 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 STX3Q13277 289 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 CDH18Q13634 790 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 HIC1Q14526 733 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 C17orf75Q9HAS0 396 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 ABI2Q9NYB9 513 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-205ENST00000538291 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 H7C4K7 107 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 GPR182O15218 404 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 CDH16O75309 829 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 AGTP01019 485 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 PTK6Q13882 451 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 NAB2Q15742 525 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.41e-7■□□□□ 8.9
SCARB1-205ENST00000538291 PRUNE1Q86TP1 453 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 CEP70Q8NHQ1 597 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 SPATA18Q8TC71 538 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 MRFAP1Q9Y605 127 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 FHOD1Q9Y613 1164 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 CDH2P19022 906 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-205ENST00000538291 GTF2H1P32780 548 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 C4orf22Q6V702 233 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 OSBPL8Q9BZF1 889 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 FOXP3Q9BZS1 431 aa17.58■□□□□ 0.4
SCARB1-205ENST00000538291 LAMC1P11047 1609 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 USP42Q9H9J4 1324 aaKnown RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 ETFBP38117 255 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 SLC11A2P49281 568 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 NAPEPLDQ6IQ20 393 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 PPP1R36Q96LQ0 422 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 PSMC3IPQ9P2W1 217 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 ZNF609O15014 1411 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 C2CD2LO14523 706 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 MYL2P10916 166 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 SFSWAPQ12872 951 aaKnown RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 PKD2L2Q9NZM6 624 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 H0Y626 953 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 ALDH18A1P54886 795 aaKnown RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 NPEPPSP55786 919 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 ZRANB3Q5FWF4 1079 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 SCAF8Q9UPN6 1271 aaKnown RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 KRT87PA6NCN2 255 aa17.57■□□□□ 0.4
SCARB1-205ENST00000538291 AARS2Q5JTZ9 985 aaKnown RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 CINPQ9BW66 212 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-205ENST00000538291 HOXA2O43364 376 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCARB1-205ENST00000538291 DMC1Q14565 340 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 SLC15A2Q16348 729 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 C16orf87Q6PH81 154 aa17.56■□□□□ 0.4
SCARB1-205ENST00000538291 UCMAQ8WVF2 138 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms