RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 FAM71AQ8IYT1 594 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 BCL7CQ8WUZ0 217 aaPredicted RBP16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 DDX27Q96GQ7 796 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 TWNKQ96RR1 684 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 CWH43Q9H720 699 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 MARCH5Q9NX47 278 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 AIPL1Q9NZN9 384 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 ARHGAP20Q9P2F6 1191 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 TIMM13Q9Y5L4 95 aaPredicted RBP16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 FAM170AA1A519 330 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 SOWAHDA6NJG2 315 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 CYB561D2O14569 222 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 NRP1O14786 923 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 CLCN1P35523 988 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 ENOSF1Q7L5Y1 443 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 SLC47A2Q86VL8 602 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 WHAMMQ8TF30 809 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 KBTBD7Q8WVZ9 684 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 SENP8Q96LD8 212 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 UROC1Q96N76 676 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 YME1L1Q96TA2 773 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 MRPL9Q9BYD2 267 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 GDAP2Q9NXN4 497 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 MRPL42Q9Y6G3 142 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
SFSWAP-206ENST00000537582 GJB5O95377 273 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 GALTP07902 379 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 FECHP22830 423 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 BTG3Q14201 252 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 WSCD1Q658N2 575 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 FAM109BQ6ICB4 259 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 OSTM1Q86WC4 334 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 OLIG1Q8TAK6 271 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 SLC20A1Q8WUM9 679 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 ELOVL4Q9GZR5 314 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 MYO6Q9UM54 1294 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 DAAM1Q9Y4D1 1078 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 SLC4A7Q9Y6M7 1214 aa16.74■□□□□ 0.27
SFSWAP-206ENST00000537582 P4HA1P13674 534 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 CDR1P51861 262 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 ZNF132P52740 706 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 NDST1P52848 882 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 SHHQ15465 462 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 RASIP1Q5U651 963 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 RAD9BQ6WBX8 426 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 DSTYKQ6XUX3 929 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 LIMS2Q7Z4I7 341 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 NOP9Q86U38 636 aaKnown RBP16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 HERC6Q8IVU3 1022 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 RSPH1Q8WYR4 309 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 SYN2Q92777 582 aaPredicted RBP16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 LPIN3Q9BQK8 851 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 HAUS4Q9H6D7 363 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 CNTN6Q9UQ52 1028 aa16.73■□□□□ 0.27
SFSWAP-206ENST00000537582 LCHNA4D1U4 455 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 GRXCR1A8MXD5 290 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 CILPO75339 1184 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ATP2A2P16615 1042 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 LMO2P25791 158 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 RABGGTBP53611 331 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 PTK2Q05397 1052 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 KLHL30Q0D2K2 578 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 CCDC142Q17RM4 750 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 TDRD12Q587J7 1177 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 TAF3Q5VWG9 929 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ZNF571Q7Z3V5 609 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 CMTR2Q8IYT2 770 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ADGRF2Q8IZF7 708 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 APPL2Q8NEU8 664 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 B3GALT6Q96L58 329 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ZSWIM1Q9BR11 485 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 NUCKS1Q9H1E3 243 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 DPEP3Q9H4B8 488 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 CYP3A43Q9HB55 503 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ZNHIT6Q9NWK9 470 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 PYCARDQ9ULZ3 195 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 FAN1Q9Y2M0 1017 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 H0YGN5 161 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 HUS1O60921 280 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 ALDH2P05091 517 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 SERPING1P05155 500 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 CFHP08603 1231 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 FERP16591 822 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 EIF4A3P38919 411 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 RAD23BP54727 409 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 HTRA4P83105 476 aaPredicted RBP16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 INCA1Q0VD86 236 aa16.72■□□□□ 0.27
SFSWAP-206ENST00000537582 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms