RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CGRRF1Q99675 332 aa18.66■□□□□ 0.58
GPN3-202ENST00000537466 PIDD1Q9HB75 910 aa18.66■□□□□ 0.58
GPN3-202ENST00000537466 WDR6Q9NNW5 1121 aaKnown RBP18.66■□□□□ 0.58
GPN3-202ENST00000537466 NR2E1Q9Y466 385 aa18.66■□□□□ 0.58
GPN3-202ENST00000537466 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
GPN3-202ENST00000537466 SEC24AO95486 1093 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 TNNC2P02585 160 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 NR3C1P04150 777 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 CPB1P15086 417 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 TNNI1P19237 187 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 HOXA9P31269 272 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 PNPLA4P41247 253 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 CASP4P49662 377 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 DUOXA2Q1HG44 320 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 RNF19BQ6ZMZ0 732 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 CCDC149Q6ZUS6 474 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 GUF1Q8N442 669 aaKnown RBP18.65■□□□□ 0.58
GPN3-202ENST00000537466 SPATA20Q8TB22 786 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 TMEM174Q8WUU8 243 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 FNBP1Q96RU3 617 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 MUTYHQ9UIF7 546 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 TRAF3IP3Q9Y228 551 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 CLUHO75153 1309 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 N4BP1O75113 896 aaKnown RBP18.65■□□□□ 0.58
GPN3-202ENST00000537466 KIF20AO95235 890 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 VNN2O95498 520 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 HNRNPA1P09651 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
GPN3-202ENST00000537466 RBP5P82980 135 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 ADCY1Q08828 1119 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 BFSP1Q12934 665 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 UVSSAQ2YD98 709 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 WSCD1Q658N2 575 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 TPGS2Q68CL5 300 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 LRRC52Q8N7C0 313 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 OR10T2Q8NGX3 314 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 GSDMAQ96QA5 445 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 RTP3Q9BQQ7 232 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
GPN3-202ENST00000537466 TRIOO75962 3097 aa18.64■□□□□ 0.58
GPN3-202ENST00000537466 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 OR6C75A6NL08 312 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 PI4K2BG5E9Z4 385 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 CALUO43852 315 aaPredicted RBP18.64■□□□□ 0.57
GPN3-202ENST00000537466 ELF1P32519 619 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 NTHL1P78549 312 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 TRAPPC11Q7Z392 1133 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 GRASPQ7Z6J2 395 aaPredicted RBP18.64■□□□□ 0.57
GPN3-202ENST00000537466 TCEAL8Q8IYN2 117 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.57
GPN3-202ENST00000537466 SMARCE1Q969G3 411 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 PGLYRP2Q96PD5 576 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 OXCT2Q9BYC2 517 aaPredicted RBP18.64■□□□□ 0.57
GPN3-202ENST00000537466 RMND1Q9NWS8 449 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 AFF4Q9UHB7 1163 aaKnown RBP18.64■□□□□ 0.57
GPN3-202ENST00000537466 DSEQ9UL01 958 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 POLIQ9UNA4 740 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 USTQ9Y2C2 406 aa18.64■□□□□ 0.57
GPN3-202ENST00000537466 PRRG1O14668 218 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 KINO60870 393 aaKnown RBP18.63■□□□□ 0.57
GPN3-202ENST00000537466 PRPF40AO75400 957 aaKnown RBP18.63■□□□□ 0.57
GPN3-202ENST00000537466 CST3P01034 146 aaPredicted RBP18.63■□□□□ 0.57
GPN3-202ENST00000537466 PRCPP42785 496 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 ZNF658Q5TYW1 1059 aaPredicted RBP18.63■□□□□ 0.57
GPN3-202ENST00000537466 CEP135Q66GS9 1140 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 METTL23Q86XA0 190 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
GPN3-202ENST00000537466 PARD3BQ8TEW8 1205 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 CRISPLD1Q9H336 500 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 L1RE1Q9UN81 338 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 INSL5Q9Y5Q6 135 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 SNX9Q9Y5X1 595 aa18.63■□□□□ 0.57
GPN3-202ENST00000537466 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
GPN3-202ENST00000537466 DCXO43602 365 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 SMC2O95347 1197 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 NR2F2P24468 414 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 CDR1P51861 262 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 DLG4P78352 724 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 GPR17Q13304 367 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 MYBPC2Q14324 1141 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 NFIL3Q16649 462 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 ZCWPW2Q504Y3 356 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 RTL10Q7L3V2 364 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 HPDLQ96IR7 371 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 GDAP2Q9NXN4 497 aa18.62■□□□□ 0.57
GPN3-202ENST00000537466 HOOK1Q9UJC3 728 aaKnown RBP18.62■□□□□ 0.57
GPN3-202ENST00000537466 XYLBO75191 536 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 POU2F2P09086 479 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 UBE2HP62256 183 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 ISM2Q6H9L7 571 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 GET4Q7L5D6 327 aaPredicted RBP18.61■□□□□ 0.57
GPN3-202ENST00000537466 OTOP3Q7RTS5 596 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 ZDHHC14Q8IZN3 488 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 MYADMQ96S97 322 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 ZCWPW1Q9H0M4 648 aa18.61■□□□□ 0.57
GPN3-202ENST00000537466 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
GPN3-202ENST00000537466 MTMR11A4FU01 709 aa18.6■□□□□ 0.57
GPN3-202ENST00000537466 HUS1O60921 280 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms