RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 HMGB1P1B2RPK0 211 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 RASA4BC9J798 803 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GOLGA8NF8WBI6 632 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 COPEO14579 308 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CXCL11O14625 94 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 OGTO15294 1046 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 RASA4O43374 803 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 EXTL3O43909 919 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GRAP2O75791 330 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 IL18RAPO95256 599 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 PNMA6AP0CW24 399 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ZFXP17010 805 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KLRC1P26715 233 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 PCSK1P29120 753 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SNRPFP62306 86 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 HERVK_113P62684 666 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 HTRA3P83110 453 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SKIV2LQ15477 1246 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 PKN1Q16512 942 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 AMHR2Q16671 573 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 EPC2Q52LR7 807 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 NOTUMQ6P988 496 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 NOP9Q86U38 636 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 FBXO16Q8IX29 292 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SRRM1Q8IYB3 904 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SAMD3Q8N6K7 520 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CEP120Q8N960 986 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GMCL1P1Q8NEA9 526 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.28□□□□□ -1.723e-9■■□□□ 13.2
SEC23A-202ENST00000537403 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 EXT2Q93063 718 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ALKBH8Q96BT7 664 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 OPTNQ96CV9 577 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 AGXT2Q9BYV1 514 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 NIF3L1Q9GZT8 377 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 VPS11Q9H270 941 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SP110Q9HB58 689 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SLC38A7Q9NVC3 462 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 PPP2R3BQ9Y5P8 575 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 P4HA2O15460 535 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 B3GAT3O94766 335 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ZWINTO95229 277 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 NPTXRO95502 500 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SUPT20HL2P0C7V6 817 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 HSPA1AP0DMV8 641 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 HSPA1BP0DMV9 641 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CYP2C19P33261 490 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SERPINB6P35237 376 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SLC1A1P43005 524 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 HIRAP54198 1017 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ZNF280AP59817 542 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 PRAMEP78395 509 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ROR1Q01973 937 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 E4F1Q66K89 784 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ITPRIPL1Q6GPH6 555 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 RAD9BQ6WBX8 426 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SLC30A10Q6XR72 485 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 TRIM67Q6ZTA4 783 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CDKL3Q8IVW4 592 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ZFPM1Q8IX07 1006 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 TC2NQ8N9U0 490 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KLHL29Q96CT2 875 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ASIC4Q96FT7 647 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 HPDLQ96IR7 371 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ZNF512Q96ME7 567 aaPredicted RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 TMEM134Q9H6X4 195 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KBTBD4Q9NVX7 518 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SAGE1Q9NXZ1 904 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SNX12Q9UMY4 172 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ITIH6Q6UXX5 1313 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CASP8AP2Q9UKL3 1982 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GRID2IPA4D2P6 1211 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GYPCP04921 128 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 THPOP40225 353 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CASP2P42575 452 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 NPTX2P47972 431 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 EIF3EP60228 445 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 TMPRSS15P98073 1019 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 PDIA2Q13087 525 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SPARCL1Q14515 664 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KRT33BQ14525 404 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ZNF235Q14590 738 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 NAB2Q15742 525 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KIZQ2M2Z5 673 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GLRA4Q5JXX5 417 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KLHDC7AQ5VTJ3 777 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 IZUMO3Q5VZ72 239 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CBWD2Q8IUF1 395 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 WDR75Q8IWA0 830 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 GSPT2Q8IYD1 628 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 VGLL2Q8N8G2 317 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ATL2Q8NHH9 583 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 CYP2W1Q8TAV3 490 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SCG3Q8WXD2 468 aaKnown RBP4.28□□□□□ -1.72
SEC23A-202ENST00000537403 MED15Q96RN5 788 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 ERGIC2Q96RQ1 377 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 SENP7Q9BQF6 1050 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 TMEM117Q9H0C3 514 aa4.28□□□□□ -1.72
SEC23A-202ENST00000537403 KLHL11Q9NVR0 708 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms