RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MAP4K3Q8IVH8 894 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ZSCAN18Q8TBC5 510 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DEPDC1BQ8WUY9 529 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 LARP4BQ92615 738 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 FIZ1Q96SL8 496 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TRPV4Q9HBA0 871 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ANK1P16157 1881 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PPEF2O14830 753 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ODC1P11926 461 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GDI1P31150 447 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DDIT3P35638 169 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 VIPR2P41587 438 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ALDH1A3P47895 512 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MYBPC2Q14324 1141 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SHKBP1Q8TBC3 707 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 RUBCNQ92622 972 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SENP8Q96LD8 212 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CRISPLD1Q9H336 500 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SLITRK6Q9H5Y7 841 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ZNF334Q9HCZ1 680 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TRPV5Q9NQA5 729 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DERAQ9Y315 318 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SPTBN2O15020 2390 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 NCOR2Q9Y618 2525 aa21.34■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SHISA7A6NL88 538 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SPTLC1O15269 473 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 NFICP08651 508 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 FZD5Q13467 585 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TMEM132DQ14C87 1099 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 C9orf57Q5W0N0 161 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SLFN12LQ6IEE8 588 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CENPPQ6IPU0 288 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ARMCX5Q6P1M9 558 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ERMP1Q7Z2K6 904 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 KIAA2013Q8IYS2 634 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 KRI1Q8N9T8 703 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SUMF1Q8NBK3 374 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ATRIPQ8WXE1 791 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 E2F7Q96AV8 911 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 LRRC3Q9BY71 257 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CCSER1Q9C0I3 900 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DNAJC25Q9H1X3 360 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 NDRG2Q9UN36 371 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SLC27A5Q9Y2P5 690 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PCDHGA2Q9Y5H1 932 aa21.33■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TICRRQ7Z2Z1 1910 aa21.33■■□□□ 1
TNFRSF1B-204ENST00000536782 A0A1W2PRU2 124 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 MTMR11A4FU01 709 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ANKRD63C9JTQ0 380 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 PIRO00625 290 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ZNF263O14978 683 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ACOT2P49753 483 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ZC2HC1CQ53FD0 456 aaPredicted RBP21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ADALQ6DHV7 355 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 TMC8Q8IU68 726 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 MFSD6LQ8IWD5 586 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ATAD1Q8NBU5 361 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ST6GALNAC4Q9H4F1 302 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ASB7Q9H672 318 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 ASB3Q9Y575 518 aa21.32■■□□□ 1
TNFRSF1B-204ENST00000536782 VPS37CA5D8V6 355 aaPredicted RBP21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 HEPACAM2A8MVW5 462 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 FAM3CQ92520 227 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 ZSCAN32Q9NX65 697 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 CCDC39Q9UFE4 941 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 AGO2Q9UKV8 859 aaKnown RBP21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 C2CD2Q9Y426 696 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 STYXL1Q9Y6J8 313 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 PIAS3Q9Y6X2 628 aa21.31■■□□□ 1
TNFRSF1B-204ENST00000536782 ANO9A1A5B4 782 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 TISP43B9A030 160 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 MTAPQ13126 283 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 YAF2Q8IY57 180 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 ZNF687Q8N1G0 1237 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 ZBTB44Q8NCP5 570 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 PSMG2Q969U7 264 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 EPSTI1Q96J88 318 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 TMEM209Q96SK2 561 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 PRMT8Q9NR22 394 aaPredicted RBP21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 HSFX1Q9UBD0 423 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 DSEQ9UL01 958 aa21.3■■□□□ 1
TNFRSF1B-204ENST00000536782 FGF19O95750 216 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 CYP11A1P05108 521 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 PDCP20941 246 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 POU5F1Q01860 360 aaKnown RBP21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 TSSK4Q6SA08 328 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 USP49Q70CQ1 688 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 DYMQ7RTS9 669 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 ZNF720Q7Z2F6 126 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 DNAJB7Q7Z6W7 309 aaPredicted RBP21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 ITIH5Q86UX2 942 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 METTL23Q86XA0 190 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 SFR1Q86XK3 245 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 DCLK2Q8N568 766 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 TTC9BQ8N6N2 239 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 OR10T2Q8NGX3 314 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 NELL1Q92832 810 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 HVCN1Q96D96 273 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 RMDN1Q96DB5 314 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 CHRDQ9H2X0 955 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms