RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 CACNA2D3Q8IZS8 1091 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 SLC35G2Q8TBE7 412 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF516Q92618 1163 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ARHGEF26Q96DR7 871 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 MED10Q9BTT4 135 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 SLC15A5A6NIM6 579 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 SLC16A3O15427 465 aaKnown RBP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 AKR1A1P14550 325 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 CTGFP29279 349 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ATP11AP98196 1134 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 MYO1EQ12965 1108 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ALCAMQ13740 583 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 KCNA10Q16322 511 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 CAPN12Q6ZSI9 719 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 NOP9Q86U38 636 aaKnown RBP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 C12orf29Q8N999 325 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 RBBP8NLQ8NC74 664 aaPredicted RBP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 KREMEN1Q96MU8 473 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 DEFB118Q96PH6 123 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 AGPAT1Q99943 283 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 STK33Q9BYT3 514 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ZWILCHQ9H900 591 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 TOMM70O94826 608 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 CPT1AP50416 773 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 GUCY1A3Q02108 690 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 SMTNL2Q2TAL5 461 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 MPZL3Q6UWV2 235 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ACOT1Q86TX2 421 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 EMC1Q8N766 993 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 C1orf131Q8NDD1 294 aaKnown RBP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
ABCA4-207ENST00000536513 GANQ9H2C0 597 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 TMEM8AQ9HCN3 771 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ADAM22Q9P0K1 906 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 ARHGAP28Q9P2N2 729 aa8.74□□□□□ -1.01
ABCA4-207ENST00000536513 TLR3O15455 904 aaKnown RBP8.73□□□□□ -1.01
ABCA4-207ENST00000536513 IFNB1P01574 187 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 ICAM3P32942 547 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 PBX3P40426 434 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 GUCY2DQ02846 1103 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 GRB14Q14449 540 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 TMEM132DQ14C87 1099 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC142Q17RM4 750 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 IQSEC1Q6DN90 963 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 PPTC7Q8NI37 304 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 LRRN4Q8WUT4 740 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 GLT1D1Q96MS3 346 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 GAD1Q99259 594 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 NUP85Q9BW27 656 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 DDX47Q9H0S4 455 aaKnown RBP8.73□□□□□ -1.01
ABCA4-207ENST00000536513 TRPV6Q9H1D0 765 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 DNAJC25-GNG10A0A024R161 153 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 A6NNZ2 444 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 CA12O43570 354 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 LDHAP00338 332 aaKnown RBP8.73□□□□□ -1.01
ABCA4-207ENST00000536513 SLC8A1P32418 973 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 VEGFBP49765 207 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 SEC24CP53992 1094 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 CACNB2Q08289 660 aaPredicted RBP8.73□□□□□ -1.01
ABCA4-207ENST00000536513 TUBB8Q3ZCM7 444 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 MFSD4BQ5TF39 518 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 ACO2Q99798 780 aaKnown RBP8.73□□□□□ -1.01
ABCA4-207ENST00000536513 C16orf70Q9BSU1 422 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 SENP6Q9GZR1 1112 aaPredicted RBP8.73□□□□□ -1.01
ABCA4-207ENST00000536513 SMYD3Q9H7B4 428 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 CITO14578 2027 aa8.73□□□□□ -1.01
ABCA4-207ENST00000536513 ZSCAN5CA6NGD5 496 aaPredicted RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 A8MXQ7 604 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 M0QYV0 167 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 ACKR2O00590 384 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 PPEF2O14830 753 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 RECQL4O94761 1208 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 PARNO95453 639 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 C22orf31O95567 290 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MYZAPP0CAP1 466 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 NEFHP12036 1026 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 CYP11B1P15538 503 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 CD52P31358 61 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 ARL2P36404 184 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 PSEN1P49768 467 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MYBPC2Q14324 1141 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 KCNT1Q5JUK3 1230 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 OR6B2Q6IFH4 312 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 RSRC2Q7L4I2 434 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 IFT20Q8IY31 132 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 NETO2Q8NC67 525 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 HPDLQ96IR7 371 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 APBA2Q99767 749 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 NUCKS1Q9H1E3 243 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 C2orf40Q9H1Z8 148 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 SAMD15Q9P1V8 674 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 AMFRQ9UKV5 643 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 KRIT1O00522 736 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 C2CD2LO14523 706 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MAGEB2O15479 319 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MEFVO15553 781 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms