RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CEBPBP17676 345 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 PTPN2P17706 415 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 GARTP22102 1010 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 TARSP26639 723 aaKnown RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 TNFSF9P41273 254 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 CSTF1Q05048 431 aaKnown RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 PPP2R3AQ06190 1150 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 ZNF528Q3MIS6 628 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 SEZ6Q53EL9 994 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 SPATA1Q5VX52 437 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 TANGO2Q6ICL3 276 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 DGLUCYQ7Z3D6 616 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 CCDC65Q8IXS2 484 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 AVENQ9NQS1 362 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 HEBP1Q9NRV9 189 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 FBXO4Q9UKT5 387 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 AGO2Q9UKV8 859 aaKnown RBP13.5□□□□□ -0.25
PRKDC-207ENST00000536483 C2CD2Q9Y426 696 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 CEP250Q9BV73 2442 aa13.5□□□□□ -0.25
PRKDC-207ENST00000536483 EIF3DO15371 548 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRKDC-207ENST00000536483 SEC24AO95486 1093 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 HARSP12081 509 aaKnown RBP13.49□□□□□ -0.25
PRKDC-207ENST00000536483 ATF2P15336 505 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 CMA1P23946 247 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 ME1P48163 572 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 CASP5P51878 434 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 KCNA1Q09470 495 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 PRSS36Q5K4E3 855 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 FOXD4L5Q5VV16 416 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-207ENST00000536483 EPM2AIP1Q7L775 607 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-207ENST00000536483 FOXD4L4Q8WXT5 416 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-207ENST00000536483 ELSPBP1Q96BH3 223 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 TCEAL4Q96EI5 215 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 NELL2Q99435 816 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 CORO1BQ9BR76 489 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 OXCT2Q9BYC2 517 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-207ENST00000536483 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 MAFFQ9ULX9 164 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 NUB1Q9Y5A7 615 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
PRKDC-207ENST00000536483 PVALEFA0A1B0GWK0 134 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 MED19A0JLT2 244 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 PIRO00625 290 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 NRG2O14511 850 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 OAZ2O95190 189 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 SLFN14P0C7P3 912 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 IDEP14735 1019 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 FCARP24071 287 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 CCR2P41597 374 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 MATR3P43243 847 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 MAGEA9P43362 315 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 SNRPFP62306 86 aaKnown RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 GRM2Q14416 872 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 PUM1Q14671 1186 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 FAM78AQ5JUQ0 283 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 TSSK4Q6SA08 328 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 ZNF852Q6ZMS4 543 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 TCEAL8Q8IYN2 117 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 ZNF507Q8TCN5 953 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-207ENST00000536483 ATRIPQ8WXE1 791 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 CLDN23Q96B33 292 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 USP25Q9UHP3 1055 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
PRKDC-207ENST00000536483 SHISA7A6NL88 538 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 TISP43B9A030 160 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 H7C4K7 107 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 ZNF197O14709 1029 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 SPTLC1O15269 473 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 NCAM2O15394 837 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 IL18RAPO95256 599 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 GCNT3O95395 438 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 HOXD13P35453 343 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 KRT85P78386 507 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 ADCY1Q08828 1119 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 FZD5Q13467 585 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 UNC13DQ70J99 1090 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 PDZD4Q76G19 769 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-207ENST00000536483 HS6ST3Q8IZP7 471 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 APPL2Q8NEU8 664 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms