RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 C3orf58Q8NDZ4 430 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 SCG3Q8WXD2 468 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 SUSD6Q92537 303 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 ITPKCQ96DU7 683 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 CHAMP1Q96JM3 812 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 UROC1Q96N76 676 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 RPF1Q9H9Y2 349 aaKnown RBP9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 CHST7Q9NS84 486 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 TUBGCP4Q9UGJ1 667 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 RAPGEFL1Q9UHV5 662 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 USP3Q9Y6I4 520 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 C5orf42Q9H799 3197 aa9.72□□□□□ -0.85
CCDC90B-219ENST00000534753 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 LOC730098B7Z3J9 87 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 OGTO15294 1046 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 POLR2DO15514 142 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 MEFVO15553 781 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 ADAM12O43184 909 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 EFEMP2O95967 443 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 IL2RAP01589 272 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 KCNE1P15382 129 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 GAP43P17677 238 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 OR1D2P34982 312 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 GUCY2FP51841 1108 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 ASIC1P78348 528 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 GTF2BQ00403 316 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 CREMQ03060 361 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 MTMR3Q13615 1198 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 SLC39A4Q6P5W5 647 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 SHC4Q6S5L8 630 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 ZNF720Q7Z2F6 126 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 CCDC65Q8IXS2 484 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 RNF168Q8IYW5 571 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 KREMEN2Q8NCW0 462 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 SNIP1Q8TAD8 396 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 LNX1Q8TBB1 728 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 POMGNT1Q8WZA1 660 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 SMG7Q92540 1137 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 HPS3Q969F9 1004 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 DNAJC19Q96DA6 116 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 NECTIN4Q96NY8 510 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 ACCSQ96QU6 501 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 LRFN3Q9BTN0 628 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 RXFP1Q9HBX9 757 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 FAM13BQ9NYF5 915 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 CNTN3Q9P232 1028 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 DPP7Q9UHL4 492 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 AGO2Q9UKV8 859 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 CFAP45Q9UL16 551 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 PCDHA7Q9UN72 937 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 MYH15Q9Y2K3 1946 aa9.71□□□□□ -0.86
CCDC90B-219ENST00000534753 PLXNA3P51805 1871 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 A0A0B4J269 797 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 PRPF6O94906 941 aaKnown RBP9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 CASP1P29466 404 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 GBP2P32456 591 aaPredicted RBP9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 AFMP43652 599 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 XKR4Q5GH76 650 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 LIN9Q5TKA1 542 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 JADE1Q6IE81 842 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 PDXDC1Q6P996 788 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 CCDC149Q6ZUS6 474 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 GPR149Q86SP6 731 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 MAP4K3Q8IVH8 894 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 IQUBQ8NA54 791 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 TDRD5Q8NAT2 981 aaKnown RBP9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 SAAL1Q96ER3 474 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 SPATA32Q96LK8 384 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 FIZ1Q96SL8 496 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 CLSTN3Q9BQT9 956 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 FGFBP2Q9BYJ0 223 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 LRRC27Q9C0I9 530 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 PCIF1Q9H4Z3 704 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 FNIP2Q9P278 1114 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 TIMM13Q9Y5L4 95 aaPredicted RBP9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 CDY1Q9Y6F8 540 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 TRIP11Q15643 1979 aa9.7□□□□□ -0.86
CCDC90B-219ENST00000534753 TTC26A0AVF1 554 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 GOLGA8IPA6NC78 632 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 GOLGA8JA6NMD2 632 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 CCL16O15467 120 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 GDF9O60383 454 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 ZIC2O95409 532 aaPredicted RBP9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 PIGRP01833 764 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 ASGR2P07307 311 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 SCP2P22307 547 aa9.69□□□□□ -0.86
CCDC90B-219ENST00000534753 FGFR3P22607 806 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms