RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 LHX1P48742 406 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 RBP5P82980 135 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 VEPH1Q14D04 833 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 ARHGAP15Q53QZ3 475 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 CWF19L1Q69YN2 538 aaKnown RBP11.23□□□□□ -0.61
CSDE1-217ENST00000534699 CRELD2Q6UXH1 353 aaPredicted RBP11.23□□□□□ -0.61
CSDE1-217ENST00000534699 DTWD2Q8NBA8 298 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 TRIM9Q9C026 710 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 ARHGEF3Q9NR81 526 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
CSDE1-217ENST00000534699 FAM237AA0A1B0GTK4 181 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CDC25CP30307 473 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 TNFSF9P41273 254 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 RPS9P46781 194 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 EHHADHQ08426 723 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 TCF15Q12870 199 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 MAPRE1Q15691 268 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 RESP18Q5W5W9 173 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 ACBD6Q9BR61 282 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 KIF9Q9HAQ2 790 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 UXTQ9UBK9 157 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 FBXO4Q9UKT5 387 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 PATJQ8NI35 1801 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 ZNF233A6NK53 670 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 ASGR2P07307 311 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 PDE6CP51160 858 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 MYL7Q01449 175 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CACNB1Q02641 598 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 DYMQ7RTS9 669 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 WDR49Q8IV35 697 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CCDC47Q96A33 483 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 EXOC4Q96A65 974 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 ANKRD36BP1Q96IX9 119 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 ZFP14Q9HCL3 533 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 YIPF1Q9Y548 306 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 BDP1A6H8Y1 2624 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 KPNA7A9QM74 516 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 MAPK13O15264 365 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 SPATA31D3P0C874 917 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 RPL10AP62906 217 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 MYO1EQ12965 1108 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 MLF2Q15773 248 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 NFIL3Q16649 462 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 SPATA31D4Q6ZUB0 917 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 RABGGTAQ92696 567 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 SMARCD2Q92925 531 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 IRF7Q92985 503 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 PSMG2Q969U7 264 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CLIC6Q96NY7 704 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 FAM126AQ9BYI3 521 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 C8orf33Q9H7E9 229 aaPredicted RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CACNG4Q9UBN1 327 aa11.22□□□□□ -0.61
CSDE1-217ENST00000534699 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
CSDE1-217ENST00000534699 CYB561D2O14569 222 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 TNNC2P02585 160 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 TCF3P15923 654 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 PCSK1P29120 753 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 ADSSP30520 456 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 ATICP31939 592 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 MAGEA11P43364 429 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 VCPP55072 806 aaKnown RBP11.21□□□□□ -0.61
CSDE1-217ENST00000534699 TSPY1Q01534 308 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 ADCY1Q08828 1119 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 ZNF268Q14587 947 aaPredicted RBP11.21□□□□□ -0.61
CSDE1-217ENST00000534699 FAM26FQ5R3K3 315 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 ZC3H14Q6PJT7 736 aaKnown RBP11.21□□□□□ -0.61
CSDE1-217ENST00000534699 HS2ST1Q7LGA3 356 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 SLC9A9Q8IVB4 645 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 GLYCTKQ8IVS8 523 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 TMEM105Q8N8V8 129 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 FAXDC2Q96IV6 333 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 GCNAQ96QF7 691 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 LRRC3Q9BY71 257 aa11.21□□□□□ -0.61
CSDE1-217ENST00000534699 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.61
CSDE1-217ENST00000534699 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.61
CSDE1-217ENST00000534699 MTMR11A4FU01 709 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 SEC24AO95486 1093 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 NFICP08651 508 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 IDEP14735 1019 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 RFX1P22670 979 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 CMA1P23946 247 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.62
CSDE1-217ENST00000534699 CEP57L1Q8IYX8 460 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 CLDN23Q96B33 292 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.62
CSDE1-217ENST00000534699 TBC1D17Q9HA65 648 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 CDH22Q9UJ99 828 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.62
CSDE1-217ENST00000534699 FANCMQ8IYD8 2048 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 KANSL1LA0AUZ9 987 aa11.2□□□□□ -0.62
CSDE1-217ENST00000534699 SLFN14P0C7P3 912 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms