RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 TAS1R2Q8TE23 839 aa18.1■□□□□ 0.49
PHRF1-206ENST00000534320 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■■■□ 21.9
PHRF1-206ENST00000534320 FAM49BQ9NUQ9 324 aa18.1■□□□□ 0.49
PHRF1-206ENST00000534320 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
PHRF1-206ENST00000534320 KCNN4O15554 427 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 H2AFXP16104 143 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-206ENST00000534320 PMLP29590 882 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 MDH1P40925 334 aaKnown RBP18.09■□□□□ 0.49
PHRF1-206ENST00000534320 ITPRIPL1Q6GPH6 555 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 C1orf131Q8NDD1 294 aaKnown RBP18.09■□□□□ 0.49
PHRF1-206ENST00000534320 HAS1Q92839 578 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 BATF3Q9NR55 127 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 BFARQ9NZS9 450 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 PCDHAC2Q9Y5I4 1007 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 ITGB3P05106 788 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 CTSHP09668 335 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 GZMAP12544 262 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 SLC13A5Q86YT5 568 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-206ENST00000534320 CEP19Q96LK0 163 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 FAM118BQ9BPY3 351 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 SIK2Q9H0K1 926 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 FIS1Q9Y3D6 152 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 SULT1E1P49888 294 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-206ENST00000534320 TTC1Q99614 292 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 TRIM62Q9BVG3 475 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 ZNF711Q9Y462 761 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 CLCN3P51790 818 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 WDR75Q8IWA0 830 aaKnown RBP18.09■□□□□ 0.49
PHRF1-206ENST00000534320 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
PHRF1-206ENST00000534320 GRAP2O75791 330 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 COILP38432 576 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-206ENST00000534320 HSPA9P38646 679 aaKnown RBP18.08■□□□□ 0.49
PHRF1-206ENST00000534320 CENPCQ03188 943 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 GRAMD1BQ3KR37 738 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 BTBD8Q5XKL5 378 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 KLC3Q6P597 504 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 SERPINI1Q99574 410 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 VPS11Q9H270 941 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 MEIS2O14770 477 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 HSPA4LO95757 839 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 NCF2P19878 526 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-206ENST00000534320 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-206ENST00000534320 OAZ1P54368 228 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 ZNF484Q5JVG2 852 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 FBXO16Q8IX29 292 aaPredicted RBP18.08■□□□□ 0.49
PHRF1-206ENST00000534320 SLC35C1Q96A29 364 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 C9orf72Q96LT7 481 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 FGD4Q96M96 766 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 KIF9Q9HAQ2 790 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 NEU2Q9Y3R4 380 aa18.08■□□□□ 0.49
PHRF1-206ENST00000534320 PPP1R12AO14974 1030 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-206ENST00000534320 KLRC4O43908 158 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 SPAG7O75391 227 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 MOCS2O96007 188 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-206ENST00000534320 SOX10P56693 466 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 UBA3Q8TBC4 463 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 ATP6V1E2Q96A05 226 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 MED15Q96RN5 788 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 CGRRF1Q99675 332 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 A0A0A6YYK5 440 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-206ENST00000534320 NPTXRO95502 500 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 RALAP11233 206 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 CYP4A22Q5TCH4 519 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 NOTUMQ6P988 496 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 PID1Q7Z2X4 250 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 BTBD6Q96KE9 485 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 SPATC1LQ9H0A9 340 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 ANGPTL3Q9Y5C1 460 aa18.08■□□□□ 0.48
PHRF1-206ENST00000534320 MPZL3Q6UWV2 235 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 SENP1Q9P0U3 644 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 NALCNQ8IZF0 1738 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 ZBBXA8MT70 800 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 GTF2A2P52657 109 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 METTL7BQ6UX53 244 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 SV2AQ7L0J3 742 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 ARHGEF26Q96DR7 871 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 SCHIP1Q9P0W5 487 aaPredicted RBP18.07■□□□□ 0.48
PHRF1-206ENST00000534320 CDH16O75309 829 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 LONRF1Q17RB8 773 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 SLC20A1Q8WUM9 679 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 ZBTB39O15060 712 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 KRT10P13645 584 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 GFAPP14136 432 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 MEI1Q5TIA1 1274 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 CASKIN2Q8WXE0 1202 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 FUT8Q9BYC5 575 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 OSGEPQ9NPF4 335 aa18.07■□□□□ 0.48
PHRF1-206ENST00000534320 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 CSPG5O95196 566 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 CYP3A7P24462 503 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 HUNKP57058 714 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 STAMBPL1Q96FJ0 436 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 CYTH2Q99418 400 aa18.06■□□□□ 0.48
PHRF1-206ENST00000534320 FOXP3Q9BZS1 431 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms