RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 SENP8Q96LD8 212 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 C7orf25Q9BPX7 421 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 FAM213AQ9BRX8 229 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 CYP4F11Q9HBI6 524 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 NUMBLQ9Y6R0 609 aa15.22■□□□□ 0.03
SF3B2-215ENST00000534307 MAP1BP46821 2468 aaKnown RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 MED19A0JLT2 244 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 OR6C75A6NL08 312 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 NRG2O14511 850 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 PRRG1O14668 218 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 POLR2DO15514 142 aaKnown RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 CYP11A1P05108 521 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 NPR3P17342 541 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 ELF1P32519 619 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 PRSS36Q5K4E3 855 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 CWF19L1Q69YN2 538 aaKnown RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 OVOS1Q6IE37 1185 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 DSTYKQ6XUX3 929 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 RNF19BQ6ZMZ0 732 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 NT5DC4Q86YG4 428 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 BORCS6Q96GS4 357 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 RPP25Q9BUL9 199 aaKnown RBP15.21■□□□□ 0.03
SF3B2-215ENST00000534307 CRISPLD1Q9H336 500 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 DPP3Q9NY33 737 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 WNT16Q9UBV4 365 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 CFAP45Q9UL16 551 aa15.21■□□□□ 0.03
SF3B2-215ENST00000534307 EIF3DO15371 548 aaKnown RBP eCLIP15.2■□□□□ 0.02
SF3B2-215ENST00000534307 EXTL3O43909 919 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 LRG1P02750 347 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 OR4Q2P0C623 313 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 ODC1P11926 461 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 CPB1P15086 417 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 ME1P48163 572 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 AMPD3Q01432 767 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 GPR17Q13304 367 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 MYBPC2Q14324 1141 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 ASTLQ6HA08 431 aaPredicted RBP15.2■□□□□ 0.02
SF3B2-215ENST00000534307 USP37Q86T82 979 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 SYCP3Q8IZU3 236 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 ST13P5Q8NFI4 369 aaPredicted RBP15.2■□□□□ 0.02
SF3B2-215ENST00000534307 OR10T2Q8NGX3 314 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 SLC2A4RGQ9NR83 387 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 RBAKQ9NYW8 714 aaPredicted RBP15.2■□□□□ 0.02
SF3B2-215ENST00000534307 CEP72Q9P209 647 aa15.2■□□□□ 0.02
SF3B2-215ENST00000534307 CHD8Q9HCK8 2581 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 KRBA1A5PL33 1030 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 MICAL2O94851 1124 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 LDHAP00338 332 aaKnown RBP15.19■□□□□ 0.02
SF3B2-215ENST00000534307 CFHP08603 1231 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 PTPN2P17706 415 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 CASP1P29466 404 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 CCR2P41597 374 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 TAF6P49848 677 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 CLCN5P51795 746 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 EPHA5P54756 1037 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 ASIC1P78348 528 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 SCARA3Q6AZY7 606 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 UNC13DQ70J99 1090 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 SIX5Q8N196 739 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 C1orf127Q8N9H9 656 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 ZNF507Q8TCN5 953 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 ING5Q8WYH8 240 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 CORO1BQ9BR76 489 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 GDE1Q9NZC3 331 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 MRPS23Q9Y3D9 190 aaKnown RBP15.19■□□□□ 0.02
SF3B2-215ENST00000534307 YIPF1Q9Y548 306 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 CHD6Q8TD26 2715 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 TCHHQ07283 1943 aa15.19■□□□□ 0.02
SF3B2-215ENST00000534307 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 GOLGA8IPA6NC78 632 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 GOLGA8JA6NMD2 632 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 KIAA0391O15091 583 aaKnown RBP15.18■□□□□ 0.02
SF3B2-215ENST00000534307 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 CEBPBP17676 345 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 TWF1Q12792 350 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 FAM26FQ5R3K3 315 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 ARMCX5Q6P1M9 558 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 STXBP4Q6ZWJ1 553 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 MTSS1LQ765P7 747 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 SCFD1Q8WVM8 642 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 TCEAL4Q96EI5 215 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 CHAMP1Q96JM3 812 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 FAM84AQ96KN4 292 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 PGLYRP2Q96PD5 576 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 DNAJC25Q9H1X3 360 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 FAM13BQ9NYF5 915 aa15.18■□□□□ 0.02
SF3B2-215ENST00000534307 FBXL21Q9UKT6 434 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms