RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	UBASH3A	P57075	661 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	GSDMD	P57764	484 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	CNTN2	Q02246	1040 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	LRRC63	Q05C16	580 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	LRP8	Q14114	963 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	GIT2	Q14161	759 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	CCL15	Q16663	113 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	BMT2	Q1RMZ1	405 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	TCP11X2	Q5H9J9	407 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	ZC3H12B	Q5HYM0	836 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	RINT1	Q6NUQ1	792 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	LRRC55	Q6ZSA7	311 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	C1orf186	Q6ZWK4	172 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	IRF2BP1	Q8IU81	584 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	ZC3H3	Q8IXZ2	948 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	C7orf61	Q8IZ16	206 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	RPUSD2	Q8IZ73	545 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	SHISA5	Q8N114	240 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	ANKRD35	Q8N283	1001 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	ARMC10	Q8N2F6	343 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	FAM43A	Q8N2R8	423 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	SDR16C5	Q8N3Y7	309 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	TOP6BL	Q8N6T0	577 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	C2orf69	Q8N8R5	385 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	MFSD2A	Q8NA29	543 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	SPC24	Q8NBT2	197 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	IPO4	Q8TEX9	1081 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	BRI3BP	Q8WY22	251 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	SECISBP2L	Q93073	1101 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	KISS1R	Q969F8	398 aa	Predicted RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	HPS3	Q969F9	1004 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	FAM46A	Q96IP4	442 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	MEGF10	Q96KG7	1140 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	CTAGE1	Q96RT6	745 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	REEP2	Q9BRK0	252 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	PAGR1	Q9BTK6	254 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	DHRS4	Q9BTZ2	278 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	BHMT2	Q9H2M3	363 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	GP6	Q9HCN6	339 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	SLC39A2	Q9NP94	309 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	OLFML3	Q9NRN5	406 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	PANK4	Q9NVE7	773 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	MORF4L1	Q9UBU8	362 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	ADD3	Q9UEY8	706 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	DBR1	Q9UK59	544 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	FBXL21	Q9UKT6	434 aa		6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	MRPS23	Q9Y3D9	190 aa	Known RBP	6.26	□□□□□ -1.41
CHKA-208	ENST00000533910	UBE4B	O95155	1302 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	ADGRA2	Q96PE1	1338 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	IGSF9B	Q9UPX0	1349 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	TRBV23-1	A0A0A0MS06	115 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	KCNJ18	B7U540	433 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	DDX39A	O00148	427 aa	Known RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	AGRP	O00253	132 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	PDHX	O00330	501 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	TBCA	O75347	108 aa	Known RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	KRT18	P05783	430 aa	Known RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	GCLC	P48506	637 aa	Predicted RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	RARRES1	P49788	294 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	PSMC5	P62195	406 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	CCNA1	P78396	465 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	MAPK7	Q13164	816 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	TBX2	Q13207	712 aa	Predicted RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	KCNJ12	Q14500	433 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	NR1I3	Q14994	352 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	KRT31	Q15323	416 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	STXBP2	Q15833	593 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	UGCG	Q16739	394 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	CST9	Q5W186	159 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	ANKRD40	Q6AI12	368 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	RINL	Q6ZS11	566 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	CCDC186	Q7Z3E2	898 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	SFR1	Q86XK3	245 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	TPH2	Q8IWU9	490 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	C4orf19	Q8IY42	314 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	MYOCD	Q8IZQ8	938 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	CCDC150	Q8NCX0	1101 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	PIGO	Q8TEQ8	1089 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	SCFD1	Q8WVM8	642 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	BTN2A2	Q8WVV5	523 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	PARK7	Q99497	189 aa	Known RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	AARSD1	Q9BTE6	412 aa	Known RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	TIPIN	Q9BVW5	301 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	FGFBP2	Q9BYJ0	223 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	PRDM14	Q9GZV8	571 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	EPN3	Q9H201	632 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	R3HDML	Q9H3Y0	253 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	ZCCHC17	Q9NP64	241 aa	Known RBP	6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	C1GALT1	Q9NS00	363 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	SEL1L	Q9UBV2	794 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	TCEAL9	Q9UHQ7	104 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	NRBP1	Q9UHY1	535 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	ODF2L	Q9ULJ1	636 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	AKT3	Q9Y243	479 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	PCDHA10	Q9Y5I2	948 aa		6.25	□□□□□ -1.41
CHKA-208	ENST00000533910	ZSWIM8	A7E2V4	1837 aa		6.25	□□□□□ -1.41

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