RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 OTOP3Q7RTS5 596 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 LRRC52Q8N7C0 313 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 TDRD5Q8NAT2 981 aaKnown RBP14.42□□□□□ -0.1
CAPN1-227ENST00000533909 ACSF2Q96CM8 615 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-227ENST00000533909 CGRRF1Q99675 332 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 TSG101Q99816 390 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 PRKD2Q9BZL6 878 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 KCTD10Q9H3F6 313 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 CYP4F11Q9HBI6 524 aa14.42□□□□□ -0.1
CAPN1-227ENST00000533909 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 ALADP13716 330 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 NR2F2P24468 414 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 BIRC3Q13489 604 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 MRPL58Q14197 206 aaKnown RBP14.41□□□□□ -0.1
CAPN1-227ENST00000533909 MYBPC2Q14324 1141 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 UVSSAQ2YD98 709 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 RTL10Q7L3V2 364 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 SLC9A9Q8IVB4 645 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 SMYD4Q8IYR2 804 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-227ENST00000533909 ELMOD1Q8N336 334 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 HPDLQ96IR7 371 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 FAM84AQ96KN4 292 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 CD320Q9NPF0 282 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 PCDHA5Q9Y5H7 936 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 CLUHO75153 1309 aa14.41□□□□□ -0.1
CAPN1-227ENST00000533909 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 LOC730098B7Z3J9 87 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 CCL16O15467 120 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 TBC1D4O60343 1298 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 KRT13P13646 458 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 ATF2P15336 505 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 AP3M2P53677 418 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 ADCY1Q08828 1119 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 ZNF658Q5TYW1 1059 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-227ENST00000533909 TRAPPC11Q7Z392 1133 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-227ENST00000533909 MFSD14AQ96MC6 490 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 AFF4Q9UHB7 1163 aaKnown RBP14.4□□□□□ -0.1
CAPN1-227ENST00000533909 MAFFQ9ULX9 164 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 SNX9Q9Y5X1 595 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
CAPN1-227ENST00000533909 ABLIM3O94929 683 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 CYP11A1P05108 521 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 HOXA9P31269 272 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-227ENST00000533909 MYL7Q01449 175 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 TSPY1Q01534 308 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 ADAM9Q13443 819 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 WSCD1Q658N2 575 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 GRASPQ7Z6J2 395 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-227ENST00000533909 RNF135Q8IUD6 432 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 ELOA2Q8IYF1 753 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-227ENST00000533909 TCEAL8Q8IYN2 117 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 ZNF707Q96C28 371 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-227ENST00000533909 IPO9Q96P70 1041 aaKnown RBP14.39□□□□□ -0.11
CAPN1-227ENST00000533909 PGLYRP2Q96PD5 576 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 GBP4Q96PP9 640 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 RHOBTB2Q9BYZ6 727 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 WDR6Q9NNW5 1121 aaKnown RBP14.39□□□□□ -0.11
CAPN1-227ENST00000533909 DMAC2Q9NW81 257 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 USTQ9Y2C2 406 aa14.39□□□□□ -0.11
CAPN1-227ENST00000533909 SCN1AP35498 2009 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 C5orf42Q9H799 3197 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 C2CD4DB7Z1M9 353 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 PSMA7O14818 248 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 CETN3O15182 167 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 DCXO43602 365 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 FSHRP23945 695 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 PSMC2P35998 433 aaKnown RBP14.38□□□□□ -0.11
CAPN1-227ENST00000533909 CASP4P49662 377 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 TNNC1P63316 161 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 GPR17Q13304 367 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 PLD1Q13393 1074 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 ISM2Q6H9L7 571 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 IQCEQ6IPM2 695 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 INTS8Q75QN2 995 aaKnown RBP14.38□□□□□ -0.11
CAPN1-227ENST00000533909 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-227ENST00000533909 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 DCP1BQ8IZD4 617 aaKnown RBP14.38□□□□□ -0.11
CAPN1-227ENST00000533909 TMEM86AQ8N2M4 240 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 MUTYHQ9UIF7 546 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 SIX4Q9UIU6 781 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 INSL5Q9Y5Q6 135 aa14.38□□□□□ -0.11
CAPN1-227ENST00000533909 MTCL1Q9Y4B5 1905 aaKnown RBP14.38□□□□□ -0.11
CAPN1-227ENST00000533909 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-227ENST00000533909 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 PPP1R2P41236 205 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 PRCPP42785 496 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 ALDH1A3P47895 512 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 VAMP7P51809 220 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 EDRF1Q3B7T1 1238 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms