RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 DSTYKQ6XUX3 929 aa19.61■□□□□ 0.73
UBXN1-216ENST00000533908 GAREM2Q75VX8 874 aa19.61■□□□□ 0.73
UBXN1-216ENST00000533908 BICD1Q96G01 975 aa19.61■□□□□ 0.73
UBXN1-216ENST00000533908 PARD6AQ9NPB6 346 aa19.61■□□□□ 0.73
UBXN1-216ENST00000533908 BLOC1S4Q9NUP1 217 aa19.61■□□□□ 0.73
UBXN1-216ENST00000533908 A0A0B4J269 797 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 MTMR11A4FU01 709 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 OR6C75A6NL08 312 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 OGTO15294 1046 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 CD2BP2O95400 341 aaKnown RBP19.6■□□□□ 0.73
UBXN1-216ENST00000533908 PIGRP01833 764 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 SOX9P48436 509 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 LIG4P49917 911 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 LILRA4P59901 499 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 SATB1Q01826 763 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 GRIN1Q05586 938 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 PPP2R3AQ06190 1150 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 ARL6IP4Q66PJ3 421 aaKnown RBP19.6■□□□□ 0.73
UBXN1-216ENST00000533908 OVOS1Q6IE37 1185 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 DNAJB7Q7Z6W7 309 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-216ENST00000533908 USP37Q86T82 979 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 ARID3BQ8IVW6 561 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-216ENST00000533908 CDK5RAP3Q96JB5 506 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 SENP8Q96LD8 212 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 FIZ1Q96SL8 496 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 FAM126AQ9BYI3 521 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-216ENST00000533908 GPR88Q9GZN0 384 aa19.6■□□□□ 0.73
UBXN1-216ENST00000533908 ANKRD63C9JTQ0 380 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 TYMPP19971 482 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 HOXC13P31276 330 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 ZNF131P52739 623 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 ATXN1P54253 815 aaKnown RBP19.59■□□□□ 0.73
UBXN1-216ENST00000533908 EPHB3P54753 998 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 DMWDQ09019 674 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 LPAL2Q16609 132 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 JADE1Q6IE81 842 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 GPBP1Q86WP2 473 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 OR10T2Q8NGX3 314 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 FAM212AQ96EL1 285 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 TMX3Q96JJ7 454 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 OXCT2Q9BYC2 517 aaPredicted RBP19.59■□□□□ 0.73
UBXN1-216ENST00000533908 SLITRK6Q9H5Y7 841 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 RPF1Q9H9Y2 349 aaKnown RBP19.59■□□□□ 0.73
UBXN1-216ENST00000533908 RBM12Q9NTZ6 932 aaKnown RBP19.59■□□□□ 0.73
UBXN1-216ENST00000533908 CPSF3Q9UKF6 684 aaKnown RBP19.59■□□□□ 0.73
UBXN1-216ENST00000533908 ODF2LQ9ULJ1 636 aa19.59■□□□□ 0.73
UBXN1-216ENST00000533908 SLC38A8A6NNN8 435 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 TISP43B9A030 160 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 H0YCG3 227 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 PIRO00625 290 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 HNRNPDLO14979 420 aaKnown RBP19.58■□□□□ 0.72
UBXN1-216ENST00000533908 NFICP08651 508 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 GJB2P29033 226 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 MLLT6P55198 1093 aaPredicted RBP19.58■□□□□ 0.72
UBXN1-216ENST00000533908 FCHO2Q0JRZ9 810 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 MYBPC2Q14324 1141 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 MCM6Q14566 821 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 C9orf57Q5W0N0 161 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 TXNDC11Q6PKC3 985 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 MYCT1Q8N699 235 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 TTC8Q8TAM2 541 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 ZFYVE19Q96K21 471 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 IKZF4Q9H2S9 585 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 C2orf42Q9NWW7 574 aa19.58■□□□□ 0.72
UBXN1-216ENST00000533908 ANK1P16157 1881 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 ANO9A1A5B4 782 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 CHADO15335 359 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 TRAK2O60296 914 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 NMT1P30419 496 aaKnown RBP19.57■□□□□ 0.72
UBXN1-216ENST00000533908 ALDH1A3P47895 512 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 CXCL12P48061 93 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 PLD1Q13393 1074 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 GPR161Q8N6U8 529 aaKnown RBP19.57■□□□□ 0.72
UBXN1-216ENST00000533908 PSMG2Q969U7 264 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 E2F7Q96AV8 911 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 TSPAN18Q96SJ8 248 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 MSTO1Q9BUK6 570 aa19.57■□□□□ 0.72
UBXN1-216ENST00000533908 K7ENM7 598 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 XPOTO43592 962 aaKnown RBP19.56■□□□□ 0.72
UBXN1-216ENST00000533908 HRO43593 1189 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 FAM13AO94988 1023 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 GABRR2P28476 465 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 ACOT2P49753 483 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 CCR3P51677 355 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 GTF2BQ00403 316 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 KYAT1Q16773 422 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 ZC2HC1CQ53FD0 456 aaPredicted RBP19.56■□□□□ 0.72
UBXN1-216ENST00000533908 Q6ZS52 159 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 LRRTM3Q86VH5 581 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 YAF2Q8IY57 180 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 CSGALNACT1Q8TDX6 532 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 AK8Q96MA6 479 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 LPIN3Q9BQK8 851 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 ATXN3LQ9H3M9 355 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 IL21Q9HBE4 155 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 PARVGQ9HBI0 331 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 GTSE1Q9NYZ3 720 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 ASB3Q9Y575 518 aa19.56■□□□□ 0.72
UBXN1-216ENST00000533908 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms