RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SRPK3Q9UPE1 567 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 DOPEY1Q5JWR5 2465 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 ENO4A6NNW6 628 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 H7C4K7 107 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 MSH4O15457 936 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 GP1BBP13224 206 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 CLCNKBP51801 687 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 ANTXR2P58335 489 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 BYSLQ13895 437 aaKnown RBP11.66□□□□□ -0.54
CSDE1-215ENST00000533818 LY6DQ14210 128 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 AMHR2Q16671 573 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 ARHGAP15Q53QZ3 475 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 LRCH2Q5VUJ6 765 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 CD300LGQ6UXG3 332 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 NFXL1Q6ZNB6 911 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
CSDE1-215ENST00000533818 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 CCDC26Q8TAB7 109 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 BAP1Q92560 729 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 TEKT3Q9BXF9 490 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 SMG9Q9H0W8 520 aaKnown RBP11.66□□□□□ -0.54
CSDE1-215ENST00000533818 CXCL16Q9H2A7 254 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 PRDM16Q9HAZ2 1276 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 BMP2KQ9NSY1 1161 aaPredicted RBP11.66□□□□□ -0.54
CSDE1-215ENST00000533818 FBXL5Q9UKA1 691 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
CSDE1-215ENST00000533818 ADAMTS9Q9P2N4 1935 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 A0A1B0GUA9 196 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 PLK4O00444 970 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 B4GALT5O43286 388 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 AP5Z1O43299 807 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 DKK1O94907 266 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 ARSAP15289 507 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 WEE1P30291 646 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 GJA4P35212 333 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 EPHB3P54753 998 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 RHDQ02161 417 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CYP4A11Q02928 519 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CRY1Q16526 586 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CTXN3Q4LDR2 81 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 GAREM2Q75VX8 874 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 PRICKLE2Q7Z3G6 844 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 RAB11FIP4Q86YS3 637 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CCDC33Q8N5R6 958 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 USP33Q8TEY7 942 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 WHAMMQ8TF30 809 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CD101Q93033 1021 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 GJA10Q969M2 543 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 LENG9Q96B70 501 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 NXPE2Q96DL1 559 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 TASP1Q9H6P5 420 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
CSDE1-215ENST00000533818 ANKMY1Q9P2S6 941 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 YIPF1Q9Y548 306 aa11.65□□□□□ -0.54
CSDE1-215ENST00000533818 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.54
CSDE1-215ENST00000533818 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 TBX3O15119 743 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 RECQL4O94761 1208 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 GABRR2P28476 465 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 CIITAP33076 1130 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 RFC5P40937 340 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 SEC13P55735 322 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 PSMC5P62195 406 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 RPL6Q02878 288 aaKnown RBP11.64□□□□□ -0.55
CSDE1-215ENST00000533818 PLD1Q13393 1074 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 UPP1Q16831 310 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 PLEKHG6Q3KR16 790 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 PREPLQ4J6C6 727 aaPredicted RBP11.64□□□□□ -0.55
CSDE1-215ENST00000533818 ANKRD45Q5TZF3 282 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 CDC6Q99741 560 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 BCCIPQ9P287 314 aaKnown RBP eCLIP11.64□□□□□ -0.55
CSDE1-215ENST00000533818 MMP17Q9ULZ9 603 aa11.64□□□□□ -0.55
CSDE1-215ENST00000533818 KIF26AQ9ULI4 1882 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 DOPEY2Q9Y3R5 2298 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 CREBBPQ92793 2442 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 E7EWF7 191 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 FGF19O95750 216 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 CYP21A2P08686 494 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 ADSSP30520 456 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 CCR10P46092 362 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 TLE3Q04726 772 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 ZNF33AQ06730 810 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 TFDP1Q14186 410 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 MRPL58Q14197 206 aaKnown RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 SMAD1Q15797 465 aaKnown RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 CC2D1AQ6P1N0 951 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 TMEM92Q6UXU6 159 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms