RNA–Protein interactions for RNA: ENST00000533783.1

CSRP3-202, Transcript of cysteine and glycine rich protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3-202ENST00000533783 SPRED2Q7Z698 418 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 FAM114A1Q8IWE2 563 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 ANP32EQ9BTT0 268 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 NKX2-4Q9H2Z4 354 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 SIX4Q9UIU6 781 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
CSRP3-202ENST00000533783 KIAA1671Q9BY89 1806 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 KCNJ18B7U540 433 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 PODXLO00592 558 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 PPEF2O14830 753 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 PMM2O15305 246 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 STX10O60499 249 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 EFEMP2O95967 443 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 CST3P01034 146 aaPredicted RBP11.28□□□□□ -0.6
CSRP3-202ENST00000533783 IGFBP6P24592 240 aaPredicted RBP11.28□□□□□ -0.6
CSRP3-202ENST00000533783 EEF1GP26641 437 aaKnown RBP11.28□□□□□ -0.6
CSRP3-202ENST00000533783 PBX3P40426 434 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 OR1G1P47890 313 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 TCP11X2Q5H9J9 407 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
CSRP3-202ENST00000533783 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 DCLRE1AQ6PJP8 1040 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 C3orf58Q8NDZ4 430 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 SAMD11Q96NU1 681 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
CSRP3-202ENST00000533783 C17orf80Q9BSJ5 609 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 TMEM8AQ9HCN3 771 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 MARCH5Q9NX47 278 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 ITGA11Q9UKX5 1188 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 CDH23Q9H251 3354 aa11.28□□□□□ -0.6
CSRP3-202ENST00000533783 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 BECN2A8MW95 431 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 F8W810 466 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 VNN1O95497 513 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 TNNC2P02585 160 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 RB1P06400 928 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 PPM1AP35813 382 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 GCLMP48507 274 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 CBWD6Q4V339 395 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 EPC2Q52LR7 807 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 DCAF17Q5H9S7 520 aaPredicted RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 CBWD3Q5JTY5 395 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 CBWD5Q5RIA9 395 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 TCERG1LQ5VWI1 586 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 KRT39Q6A163 491 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 APTXQ7Z2E3 356 aaKnown RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 GAS2L3Q86XJ1 694 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 EPS8L1Q8TE68 723 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 BCL7CQ8WUZ0 217 aaPredicted RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 RABGGTAQ92696 567 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 TIFAQ96CG3 184 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 IGSF21Q96ID5 467 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 COLEC11Q9BWP8 271 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 SLC28A3Q9HAS3 691 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 MAGEC2Q9UBF1 373 aaPredicted RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 PRG3Q9Y2Y8 225 aaPredicted RBP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 COQ4Q9Y3A0 265 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.6
CSRP3-202ENST00000533783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.27□□□□□ -0.6
CSRP3-202ENST00000533783 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 P4HA2O15460 535 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 B3GAT3O94766 335 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 KIF4AO95239 1232 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
CSRP3-202ENST00000533783 ITGB3P05106 788 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 ITGB1P05556 798 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 ATP1A3P13637 1013 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 PAX3P23760 479 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 POLR2BP30876 1174 aaKnown RBP11.26□□□□□ -0.61
CSRP3-202ENST00000533783 MTIF2P46199 727 aaKnown RBP11.26□□□□□ -0.61
CSRP3-202ENST00000533783 FMO5P49326 533 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 AARSP49588 968 aaKnown RBP eCLIP11.26□□□□□ -0.61
CSRP3-202ENST00000533783 MXI1P50539 228 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 RBP5P82980 135 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 PLCB3Q01970 1234 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 KRT31Q15323 416 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 MIIPQ5JXC2 388 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
CSRP3-202ENST00000533783 LRRC52Q8N7C0 313 aa11.26□□□□□ -0.61
CSRP3-202ENST00000533783 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms