RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 ETS2P15036 469 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 GALK1P51570 392 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TP53BP2Q13625 1128 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CDC37Q16543 378 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CCNYQ8ND76 341 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 VPS39Q96JC1 886 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 VPS50Q96JG6 964 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 HEMGNQ9BXL5 484 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PNMA8CA0A1B0GUJ8 204 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TSPAN4O14817 238 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PPEF1O14829 653 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CLASP2O75122 1294 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 LARGE1O95461 756 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CCDC166P0CW27 439 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TRAPPC10P48553 1259 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 LRRC41Q15345 812 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 IZUMO3Q5VZ72 239 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 AKAP14Q86UN6 197 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PASD1Q8IV76 773 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CDC26Q8NHZ8 85 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ENKURQ8TC29 256 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 JADE3Q92613 823 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 MAGEB18Q96M61 343 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 AK8Q96MA6 479 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TMBIM4Q9HC24 238 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 UBE2TQ9NPD8 197 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 SH3BP1Q9Y3L3 701 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 K7ENM7 598 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 POLR2EP19388 210 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CYP4A11Q02928 519 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 AASDHQ4L235 1098 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CYP4A22Q5TCH4 519 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 DNAJC24Q6P3W2 148 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 G2E3Q7L622 706 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CACNA2D2Q9NY47 1150 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 MYRFQ9Y2G1 1151 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 LOC100653049A0A140TA62 436 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 SPDYE2BA6NHP3 402 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 MATN2O00339 956 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 KRT34O76011 436 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 SPDYE6P0CI01 402 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ATP6V1C1P21283 382 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ADAM17P78536 824 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 SPANXN2Q5MJ10 180 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 COL23A1Q86Y22 540 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 GDPD5Q8WTR4 605 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 DHX38Q92620 1227 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CEP95Q96GE4 821 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TINF2Q9BSI4 451 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TRNAU1APQ9NX07 287 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PSMC3IPQ9P2W1 217 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 GGA2Q9UJY4 613 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 BTBD3Q9Y2F9 522 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 FOSP01100 380 aaPredicted RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 POLGP54098 1239 aaPredicted RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 KRT72Q14CN4 511 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 IL17REQ8NFR9 667 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PHACTR1Q9C0D0 580 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 CYP39A1Q9NYL5 469 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PALLDQ8WX93 1383 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PHGDHO43175 533 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 SMNDC1O75940 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PSMA4P25789 261 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 OLR1P78380 273 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 SLC29A2Q14542 456 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 DGUOKQ16854 277 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 MIGA2Q7L4E1 593 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 SETD3Q86TU7 594 aaPredicted RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 LRRC6Q86X45 466 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PCYOX1LQ8NBM8 494 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 MAGED4Q96JG8 741 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 TRIM51Q9BSJ1 452 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 ZWILCHQ9H900 591 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 ABCF3Q9NUQ8 709 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PARP4Q9UKK3 1724 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 VWA5AO00534 786 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 NEMP1O14524 444 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 TBC1D12O60347 775 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 SPATA5Q8NB90 893 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 SRPK1Q96SB4 655 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 LIMA1Q9UHB6 759 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PRG3Q9Y2Y8 225 aaPredicted RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PIK3CAP42336 1068 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 ARMCX2Q7L311 632 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 THEM5Q8N1Q8 247 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 RIN3Q8TB24 985 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 PPCSQ9HAB8 311 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 OLA1Q9NTK5 396 aaKnown RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 KRT36O76013 467 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 ACAP1Q15027 740 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 TRIP4Q15650 581 aaPredicted RBP8.19□□□□□ -1.1
CSRP1-218ENST00000533402 TSC22D1Q15714 1073 aa8.19□□□□□ -1.1
CSRP1-218ENST00000533402 EFHC1Q5JVL4 640 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms