RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
SSBP3-214ENST00000533209 ARHGEF37A1IGU5 675 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 TGM5O43548 720 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 PHACTR2O75167 634 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 STAU1O95793 577 aaKnown RBP12.89□□□□□ -0.35
SSBP3-214ENST00000533209 GLUD1P00367 558 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 GCLMP48507 274 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 MYL6P60660 151 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 YWHAHQ04917 246 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-214ENST00000533209 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 TRPC3Q13507 836 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 NCOA4Q13772 614 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 OVOS1Q6IE37 1185 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 SYCE2Q6PIF2 218 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
SSBP3-214ENST00000533209 ARMCX3Q9UH62 379 aaPredicted RBP12.89□□□□□ -0.35
SSBP3-214ENST00000533209 DSEQ9UL01 958 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 L1RE1Q9UN81 338 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
SSBP3-214ENST00000533209 SNX9Q9Y5X1 595 aa12.89□□□□□ -0.35
SSBP3-214ENST00000533209 HUS1O60921 280 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 HLA-DRAP01903 254 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 SPATA31D3P0C874 917 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 SRGAP2BP0DMP2 458 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 HOXB8P17481 243 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 PTMSP20962 102 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 ATICP31939 592 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 GTF2H1P32780 548 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 ROR1Q01973 937 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 CLUL1Q15846 466 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 SOWAHAQ2M3V2 549 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 SPATA31D4Q6ZUB0 917 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 TOP6BLQ8N6T0 577 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 SLC35C1Q96A29 364 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 S1PR5Q9H228 398 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 METTL14Q9HCE5 456 aaKnown RBP12.88□□□□□ -0.35
SSBP3-214ENST00000533209 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 DZANK1Q9NVP4 752 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
SSBP3-214ENST00000533209 UNC80Q8N2C7 3258 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 WDR27A2RRH5 827 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 OR6C75A6NL08 312 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 STX10O60499 249 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 ABLIM3O94929 683 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 OR4Q2P0C623 313 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 KCNQ1P51787 676 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 MARSP56192 900 aaKnown RBP12.87□□□□□ -0.35
SSBP3-214ENST00000533209 ARPP19P56211 112 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
SSBP3-214ENST00000533209 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-214ENST00000533209 CT47A1Q5JQC4 288 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-214ENST00000533209 TCERG1LQ5VWI1 586 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 KRT39Q6A163 491 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 SASS6Q6UVJ0 657 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 OSTM1Q86WC4 334 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 IRF2BP1Q8IU81 584 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-214ENST00000533209 SMRP1Q8NCR6 262 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 KREMEN2Q8NCW0 462 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 TAS1R2Q8TE23 839 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 HDAC7Q8WUI4 952 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 KBTBD7Q8WVZ9 684 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 TMEM209Q96SK2 561 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 APOL5Q9BWW9 433 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 OXCT2Q9BYC2 517 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-214ENST00000533209 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 MMRN2Q9H8L6 949 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 FBXW11Q9UKB1 542 aa12.87□□□□□ -0.35
SSBP3-214ENST00000533209 A0A0C4DFX4 3053 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 GRXCR2A6NFK2 248 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 GABRDO14764 452 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 LRRN2O75325 713 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 FGFR1OPO95684 399 aaKnown RBP12.86□□□□□ -0.35
SSBP3-214ENST00000533209 GNA14O95837 355 aa12.86□□□□□ -0.35
SSBP3-214ENST00000533209 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
SSBP3-214ENST00000533209 CPB1P15086 417 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms