RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 BORCS6Q96GS4 357 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 ANKRD36BP1Q96IX9 119 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 KCTD10Q9H3F6 313 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 CYP4F11Q9HBI6 524 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 C11orf16Q9NQ32 467 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 INTS13Q9NVM9 706 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 AFF4Q9UHB7 1163 aaKnown RBP16.58■□□□□ 0.24
CPSF1-210ENST00000532935 DSEQ9UL01 958 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 POLIQ9UNA4 740 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 PTPRJQ12913 1337 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 TECTAO75443 2155 aa16.58■□□□□ 0.24
CPSF1-210ENST00000532935 PRRG1O14668 218 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 EXOC3O60645 756 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 N4BP1O75113 896 aaKnown RBP16.57■□□□□ 0.24
CPSF1-210ENST00000532935 SEC24AO95486 1093 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 TNNC2P02585 160 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 KRT19P08727 400 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 RBP5P82980 135 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 FAM160A1Q05DH4 1040 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 CYP24A1Q07973 514 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 MYBPC2Q14324 1141 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 KCNB1Q14721 858 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 PSMD6Q15008 389 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 PTPN21Q16825 1174 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 DUOXA2Q1HG44 320 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 SCARA3Q6AZY7 606 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 RNF19BQ6ZMZ0 732 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 GRASPQ7Z6J2 395 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-210ENST00000532935 WDR49Q8IV35 697 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 LRRC52Q8N7C0 313 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 OR5B17Q8NGF7 314 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 LIMD1Q9UGP4 676 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 SIX4Q9UIU6 781 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 MAFFQ9ULX9 164 aa16.57■□□□□ 0.24
CPSF1-210ENST00000532935 FAM86C2PA6NEL3 165 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 GPR37L1O60883 481 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 KIF20AO95235 890 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 DLATP10515 647 aaKnown RBP16.56■□□□□ 0.24
CPSF1-210ENST00000532935 GBP2P32456 591 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-210ENST00000532935 NTHL1P78549 312 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 BFSP1Q12934 665 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 PNOCQ13519 176 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 TMEM31Q5JXX7 168 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 WSCD1Q658N2 575 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 GET4Q7L5D6 327 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-210ENST00000532935 METTL23Q86XA0 190 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 TMEM174Q8WUU8 243 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 EDAQ92838 391 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 MFSD14AQ96MC6 490 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 FNBP1Q96RU3 617 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 MYADMQ96S97 322 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 CGRRF1Q99675 332 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 DMAC2Q9NW81 257 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 INSL5Q9Y5Q6 135 aa16.56■□□□□ 0.24
CPSF1-210ENST00000532935 PDXKO00764 312 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 PRPF40AO75400 957 aaKnown RBP16.55■□□□□ 0.24
CPSF1-210ENST00000532935 VNN2O95498 520 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 LRG1P02750 347 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 ASGR2P07307 311 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 TNNI1P19237 187 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 FSHRP23945 695 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 ZXDAP98168 799 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 GPR17Q13304 367 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 SLC9A9Q8IVB4 645 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 OR10T2Q8NGX3 314 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 RTP3Q9BQQ7 232 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
CPSF1-210ENST00000532935 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.55■□□□□ 0.24
CPSF1-210ENST00000532935 DNMT3BQ9UBC3 853 aaKnown RBP16.55■□□□□ 0.24
CPSF1-210ENST00000532935 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
CPSF1-210ENST00000532935 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-210ENST00000532935 HUS1O60921 280 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 NR3C1P04150 777 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
CPSF1-210ENST00000532935 TRAPPC11Q7Z392 1133 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 THEM5Q8N1Q8 247 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 GUF1Q8N442 669 aaKnown RBP16.54■□□□□ 0.24
CPSF1-210ENST00000532935 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 LRFN3Q9BTN0 628 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-210ENST00000532935 GDAP2Q9NXN4 497 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 EPS15L1Q9UBC2 864 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 SORCS3Q9UPU3 1222 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
CPSF1-210ENST00000532935 MTMR11A4FU01 709 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 MYO1EQ12965 1108 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 PDCL2Q8N4E4 241 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 PLEKHO2Q8TD55 490 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 HPDLQ96IR7 371 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 CRISPLD1Q9H336 500 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 RMND1Q9NWS8 449 aa16.53■□□□□ 0.24
CPSF1-210ENST00000532935 L1RE1Q9UN81 338 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms