RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CRLF3Q8IUI8 442 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 DCP1BQ8IZD4 617 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ARRDC4Q8NCT1 418 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 PPP1R14AQ96A00 147 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 PDCD2LQ9BRP1 358 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 KLHL11Q9NVR0 708 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 WARS2Q9UGM6 360 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 SATB2Q9UPW6 733 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 H0YC42 278 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 APOL1O14791 398 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ITGB3P05106 788 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZFXP17010 805 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 KIZQ2M2Z5 673 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 GLRA4Q5JXX5 417 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 GRAMD4Q6IC98 578 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 PCSK9Q8NBP7 692 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 DNERQ8NFT8 737 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 HPDLQ96IR7 371 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 MED15Q96RN5 788 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 GEMIN8Q9NWZ8 242 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 FAM47E-STBD1D6RA91 191 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 GOLGA8RI6L899 631 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 GPR182O15218 404 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 KDM1AO60341 852 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 PDGFRAP16234 1089 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 NEK2P51955 445 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 GPS1Q13098 491 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC157Q569K6 752 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZC3H18Q86VM9 953 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 MFN1Q8IWA4 741 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 KCNB2Q92953 911 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 AGO4Q9HCK5 861 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 LSM7Q9UK45 103 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZC3H4Q9UPT8 1303 aaKnown RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC159P0C7I6 412 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ZNF286BP0CG31 522 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 CYP2C8P10632 490 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 HSD17B4P51659 736 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 HDAC4P56524 1084 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 Q4G0T1 1027 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 ASCC2Q9H1I8 757 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-232ENST00000532649 TRAF3IP3Q9Y228 551 aa9.16□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC78A2IDD5 438 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 VIL1P09327 827 aaKnown RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 EIF3BP55884 814 aaKnown RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 PGM5Q15124 567 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.15□□□□□ -0.943e-6■■■■■ 50.8
CTNND1-232ENST00000532649 KLHL29Q96CT2 875 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 P2RX7Q99572 595 aaKnown RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 DDX47Q9H0S4 455 aaKnown RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 AGPAT3Q9NRZ7 376 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 WDR35Q9P2L0 1181 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 HDAC6Q9UBN7 1215 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 TRIM33Q9UPN9 1127 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 C2CD2LO14523 706 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 KRT37O76014 449 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 KLRC1P26715 233 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 TAF6P49848 677 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 NNTQ13423 1086 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 MTF1Q14872 753 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 SNX17Q15036 470 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 LY6KQ17RY6 165 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 OOSP2Q86WS3 158 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 VGLL2Q8N8G2 317 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 C1orf54Q8WWF1 131 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 MCEEQ96PE7 176 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 STARD7Q9NQZ5 370 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 IRF1P10914 325 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 NAMPTP43490 491 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 ALDH7A1P49419 539 aaKnown RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 COPS2P61201 443 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 SLC30A10Q6XR72 485 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 SPATA16Q9BXB7 569 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 ABCB6Q9NP58 842 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 GRAP2O75791 330 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 STAG3L1P0CL83 205 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 PPATQ06203 517 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 ADCY2Q08462 1091 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 EFTUD2Q15029 972 aaKnown RBP eCLIP9.15□□□□□ -0.943e-8■■■■■ 29.5
CTNND1-232ENST00000532649 SLC18A3Q16572 532 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 METTL7BQ6UX53 244 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 ST13P4Q8IZP2 240 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-232ENST00000532649 CCDC90BQ9GZT6 254 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 GPRC5DQ9NZD1 345 aa9.15□□□□□ -0.94
CTNND1-232ENST00000532649 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.95
CTNND1-232ENST00000532649 KRT14P02533 472 aa9.15□□□□□ -0.95
CTNND1-232ENST00000532649 ESRRAP11474 423 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-232ENST00000532649 CHRNA3P32297 505 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms