RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CASP5P51878 434 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 SPIRE2Q8WWL2 714 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 SIK2Q9H0K1 926 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 RANBP17Q9H2T7 1088 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 ECT2Q9H8V3 914 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 XPO7Q9UIA9 1087 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 ANGPTL2Q9UKU9 493 aa16.1■□□□□ 0.17
PCDHA3-202ENST00000532566 VWA5AO00534 786 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ZNF189O75820 626 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 GPD1P21695 349 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ART3Q13508 389 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 CREG2Q8IUH2 290 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 RIBC1Q8N443 379 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ATG4AQ8WYN0 398 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 SEC16BQ96JE7 1060 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 DDX23Q9BUQ8 820 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ZFATQ9P243 1243 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 PAK5Q9P286 719 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ZC3H7BQ9UGR2 993 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 PAPOLAP51003 745 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 SESN2P58004 480 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 CEP120Q8N960 986 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 MED15Q96RN5 788 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 SERPINI1Q99574 410 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 TTC1Q99614 292 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 TRIM62Q9BVG3 475 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 METTL5Q9NRN9 209 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 H0Y3Z8 333 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 TNPO2O14787 897 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 EPHB1P54762 984 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 NLRP11P59045 1033 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 KCNA1Q09470 495 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 RYBPQ8N488 228 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 UBA3Q8TBC4 463 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 SKA2Q8WVK7 121 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 EPAS1Q99814 870 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 XRN1Q8IZH2 1706 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 A0A0U1RQJ8 604 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 CCDC195A0A1B0GUA6 201 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 LMNAP02545 664 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 CYP2C9P11712 490 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 RARGP13631 454 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 TAC1P20366 129 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 DSG3P32926 999 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 SYCP2LQ5T4T6 812 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ERO1BQ86YB8 467 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 ANGPTL3Q9Y5C1 460 aa16.09■□□□□ 0.17
PCDHA3-202ENST00000532566 FRMD3A2A2Y4 597 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 PIK3CDO00329 1044 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 CES2O00748 559 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 PSMD10O75832 226 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 KITP10721 976 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 CLCN3P51790 818 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 SOX10P56693 466 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 PTENP60484 403 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 ICE2Q659A1 982 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 MPZL3Q6UWV2 235 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 SCG3Q8WXD2 468 aaKnown RBP16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 CHMP2BQ9UQN3 213 aa16.08■□□□□ 0.17
PCDHA3-202ENST00000532566 EPHB6O15197 1021 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 SPAG6O75602 509 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 PROSCO94903 275 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 ZWINTO95229 277 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 PRKCIP41743 596 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 SULT1E1P49888 294 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 COBLL1Q53SF7 1204 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 FSCBQ5H9T9 825 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 DNERQ8NFT8 737 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 SERPINB12Q96P63 405 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 PARK7Q99497 189 aaKnown RBP16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 CFLARO15519 480 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 MAP3K7O43318 606 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 TTC4O95801 387 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 SLURP2P0DP57 97 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 TPI1P60174 286 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 C3orf62Q6ZUJ4 267 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 MYLK4Q86YV6 388 aaPredicted RBP16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 HDAC7Q8WUI4 952 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 PPWD1Q96BP3 646 aaKnown RBP16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 PGBD4Q96DM1 585 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 VCX3AQ9NNX9 186 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 PCDHGC5Q9Y5F6 944 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 USH1CQ9Y6N9 552 aa16.08■□□□□ 0.16
PCDHA3-202ENST00000532566 ZSCAN5CA6NGD5 496 aaPredicted RBP16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 TRIM66O15016 1216 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 ITGA4P13612 1032 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 PBX1P40424 430 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 RASIP1Q5U651 963 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 MFSD14CQ5VZR4 134 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 EFHD1Q9BUP0 239 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 ZNF518BQ9C0D4 1074 aa16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 ALG13Q9NP73 1137 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 CPSF2Q9P2I0 782 aaKnown RBP16.07■□□□□ 0.16
PCDHA3-202ENST00000532566 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms