RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 EIF2AQ9BY44 585 aaKnown RBP6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRPL4Q9BYD3 311 aaKnown RBP6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 PDZD7Q9H5P4 517 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 RSAD1Q9HA92 442 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 LMCD1Q9NZU5 365 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 HCSTQ9UBK5 93 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 RCOR1Q9UKL0 485 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 PLAGL2Q9UPG8 496 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 USP20Q9Y2K6 914 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 HES2Q9Y543 173 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 IPPQ9Y573 584 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 MTCH2Q9Y6C9 303 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 MICAL3Q7RTP6 2002 aa6.32□□□□□ -1.4
HMGB1P42-201ENST00000532126 ARL5CA6NH57 179 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 MEIS3P2A8K0S8 358 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 FGF18O76093 207 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 SCP2P22307 547 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 AKAP5P24588 427 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PPM1AP35813 382 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 MLH1P40692 756 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PTGIRP43119 386 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ALDH7A1P49419 539 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ARSDP51689 593 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF131P52739 623 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 RPS26P62854 115 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 NUCB2P80303 420 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PIN1Q13526 163 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 DCAF4L1Q3SXM0 396 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM214Q6NUQ4 689 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 KCNT2Q6UVM3 1135 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 SPATC1Q76KD6 591 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 DYMQ7RTS9 669 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 C19orf47Q8N9M1 422 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 IQUBQ8NA54 791 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 COLGALT1Q8NBJ5 622 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM161BQ8NDZ6 487 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRPL38Q96DV4 380 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF558Q96NG5 402 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 GAD1Q99259 594 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 OXCT2Q9BYC2 517 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 FAM126AQ9BYI3 521 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 LMAN2LQ9H0V9 348 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 CDH19Q9H159 772 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 NXF3Q9H4D5 531 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 CWH43Q9H720 699 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PARVGQ9HBI0 331 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ALG13Q9NP73 1137 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ENAMQ9NRM1 1142 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 TBC1D13Q9NVG8 400 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ARHGAP28Q9P2N2 729 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 KANSL3Q9P2N6 904 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 TNFSF13BQ9Y275 285 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 GIT1Q9Y2X7 761 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 GPC6Q9Y625 555 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 EVPLQ92817 2033 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 ARID2Q68CP9 1835 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 PTPRSQ13332 1948 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 WDR81Q562E7 1941 aa6.31□□□□□ -1.4
HMGB1P42-201ENST00000532126 MYMKA6NI61 221 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 K7ENM7 598 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 POLR2DO15514 142 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZC3H11AO75152 810 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 CSPG5O95196 566 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 POMCP01189 267 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 EDN1P05305 212 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ITGB1P05556 798 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 EDN3P14138 238 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 IDEP14735 1019 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 GAP43P17677 238 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 DNAJB1P25685 340 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ABCD1P33897 745 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 PBX3P40426 434 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 AFF1P51825 1210 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 NCKAP1LP55160 1127 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 BCAR1P56945 870 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 KRT17Q04695 432 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 UBE3AQ05086 875 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 MLC1Q15049 377 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 PPP2R5EQ16537 467 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF568Q3ZCX4 644 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 TIGD5Q53EQ6 642 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 C10orf62Q5T681 223 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 RESP18Q5W5W9 173 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 EEF1DP3Q658K8 133 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 LIAT1Q6ZQX7 453 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms