RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 TBXAS1P24557 533 aaPredicted RBP18.9■□□□□ 0.62
CTSB-222ENST00000531551 PPM1AP35813 382 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 AARSP49588 968 aaKnown RBP eCLIP18.9■□□□□ 0.62
CTSB-222ENST00000531551 FAM171A1Q5VUB5 890 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 SUSD3Q96L08 255 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 NUP58Q9BVL2 599 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 CERS4Q9HA82 394 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 L1RE1Q9UN81 338 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 COLQQ9Y215 455 aaPredicted RBP18.9■□□□□ 0.62
CTSB-222ENST00000531551 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.9■□□□□ 0.62
CTSB-222ENST00000531551 PDE4DIPQ5VU43 2346 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 ITIH6Q6UXX5 1313 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 CARNS1A5YM72 827 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 FGF18O76093 207 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 PAX3P23760 479 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 BMPR1AP36894 532 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 GCNT1Q02742 428 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 KRT17Q04695 432 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 SOWAHAQ2M3V2 549 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 WSCD1Q658N2 575 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 PPP2R2DQ66LE6 453 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 KLHL23Q8NBE8 558 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 B3GALT6Q96L58 329 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 KREMEN1Q96MU8 473 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 SPAG5Q96R06 1193 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 MRPL45Q9BRJ2 306 aaKnown RBP18.9■□□□□ 0.62
CTSB-222ENST00000531551 SDCBP2Q9H190 292 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 RWDD3Q9Y3V2 267 aa18.9■□□□□ 0.62
CTSB-222ENST00000531551 CSPG5O95196 566 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 TKTP29401 623 aaKnown RBP18.89■□□□□ 0.61
CTSB-222ENST00000531551 USP8P40818 1118 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 ELAVL2Q12926 359 aaKnown RBP18.89■□□□□ 0.61
CTSB-222ENST00000531551 TAS1R1Q7RTX1 841 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 METTL23Q86XA0 190 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 ADGRF2Q8IZF7 708 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 PDCL2Q8N4E4 241 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 TOP6BLQ8N6T0 577 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 OR6B3Q8NGW1 331 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 TGS1Q96RS0 853 aaKnown RBP18.89■□□□□ 0.61
CTSB-222ENST00000531551 SLC28A3Q9HAS3 691 aa18.89■□□□□ 0.61
CTSB-222ENST00000531551 M0QZQ0 153 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 TAP1Q03518 808 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 ZNF394Q53GI3 561 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 GPIHBP1Q8IV16 184 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 FAM81BQ96LP2 452 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 BCO2Q9BYV7 579 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 CEP72Q9P209 647 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 PCDHB8Q9UN66 801 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 SCN1AP35498 2009 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 ARHGEF37A1IGU5 675 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 TPM1P09493 284 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 PNMA6AP0CW24 399 aaPredicted RBP18.88■□□□□ 0.61
CTSB-222ENST00000531551 KRT5P13647 590 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 RFX1P22670 979 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 DNAJB2P25686 324 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 CASP14P31944 242 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 DRAP1Q14919 205 aaPredicted RBP18.88■□□□□ 0.61
CTSB-222ENST00000531551 KIAA1841Q6NSI8 718 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 ENOSF1Q7L5Y1 443 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 DPH6Q7L8W6 267 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
CTSB-222ENST00000531551 SNX25Q9H3E2 840 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 CYP3A43Q9HB55 503 aa18.88■□□□□ 0.61
CTSB-222ENST00000531551 ALG13Q9NP73 1137 aaKnown RBP18.88■□□□□ 0.61
CTSB-222ENST00000531551 GYPCP04921 128 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 CDC25BP30305 580 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 CA8P35219 290 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.87■□□□□ 0.61
CTSB-222ENST00000531551 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 VN1R3Q9BXE9 311 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 STK33Q9BYT3 514 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 FBXL5Q9UKA1 691 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 DSEQ9UL01 958 aa18.87■□□□□ 0.61
CTSB-222ENST00000531551 C2CD2LO14523 706 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 PDGFRBP09619 1106 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 GNL1P36915 607 aaPredicted RBP18.86■□□□□ 0.61
CTSB-222ENST00000531551 YWHAEP62258 255 aaKnown RBP18.86■□□□□ 0.61
CTSB-222ENST00000531551 YWHAHQ04917 246 aaPredicted RBP18.86■□□□□ 0.61
CTSB-222ENST00000531551 GOLGA8FQ08AF8 430 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 GOLGA8DPQ0D2H9 430 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 ORC1Q13415 861 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 TRIM14Q14142 442 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 USP41Q3LFD5 358 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 FIGNQ5HY92 759 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 OVOS1Q6IE37 1185 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 TMEM270Q6UE05 265 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 VPS52Q8N1B4 723 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 TMEM86AQ8N2M4 240 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 ZNF397Q8NF99 534 aaPredicted RBP18.86■□□□□ 0.61
CTSB-222ENST00000531551 KBTBD7Q8WVZ9 684 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 ARNTL2Q8WYA1 636 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 TIFAQ96CG3 184 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 PLVAPQ9BX97 442 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 TTYH3Q9C0H2 523 aa18.86■□□□□ 0.61
CTSB-222ENST00000531551 DDX43Q9NXZ2 648 aaKnown RBP18.86■□□□□ 0.61
CTSB-222ENST00000531551 PUF60Q9UHX1 559 aaKnown RBP18.86■□□□□ 0.61
CTSB-222ENST00000531551 LUC7L2Q9Y383 392 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms