RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 DRICH1Q6PGQ1 229 aaPredicted RBP6.35□□□□□ -1.39
CASP4-210ENST00000531546 GPRIN1Q7Z2K8 1008 aa6.35□□□□□ -1.39
CASP4-210ENST00000531546 FAM98AQ8NCA5 519 aaKnown RBP6.35□□□□□ -1.39
CASP4-210ENST00000531546 ELF4Q99607 663 aaPredicted RBP6.35□□□□□ -1.39
CASP4-210ENST00000531546 GLIS2Q9BZE0 524 aaPredicted RBP6.35□□□□□ -1.39
CASP4-210ENST00000531546 INTS7Q9NVH2 962 aaKnown RBP6.35□□□□□ -1.39
CASP4-210ENST00000531546 TLK1Q9UKI8 766 aa6.35□□□□□ -1.39
CASP4-210ENST00000531546 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
CASP4-210ENST00000531546 PAPPA2Q9BXP8 1791 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 MYPNQ86TC9 1320 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 UNC119BA6NIH7 251 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 OPA1O60313 960 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 PCDH8O95206 1070 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 LY86O95711 162 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 ESRRBO95718 433 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 TM4SF1P30408 202 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 EPS15P42566 896 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 KIF23Q02241 960 aaPredicted RBP6.34□□□□□ -1.39
CASP4-210ENST00000531546 CD69Q07108 199 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 MPP3Q13368 585 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 RRS1Q15050 365 aaKnown RBP6.34□□□□□ -1.39
CASP4-210ENST00000531546 CCDC93Q567U6 631 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 MICALCLQ6ZW33 695 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 XYLT1Q86Y38 959 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 GPC2Q8N158 579 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 LRFN3Q9BTN0 628 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
CASP4-210ENST00000531546 ANKRD31Q8N7Z5 1873 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 H0YGN5 161 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 NRP2O60462 931 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 FLT3P36888 993 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 KRTAP10-9P60411 292 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 BMS1Q14692 1282 aaKnown RBP6.33□□□□□ -1.4
CASP4-210ENST00000531546 FNDC3BQ53EP0 1204 aaKnown RBP6.33□□□□□ -1.4
CASP4-210ENST00000531546 FBXO46Q6PJ61 603 aaPredicted RBP6.33□□□□□ -1.4
CASP4-210ENST00000531546 TAS1R1Q7RTX1 841 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 OR10H5Q8NGA6 315 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 RTF1Q92541 710 aaKnown RBP6.33□□□□□ -1.4
CASP4-210ENST00000531546 CLUHP3Q96NS8 147 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.33□□□□□ -1.4
CASP4-210ENST00000531546 NRXN2Q9P2S2 1712 aa6.33□□□□□ -1.4
CASP4-210ENST00000531546 RTL1A6NKG5 1358 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 EYSQ5T1H1 3165 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 B5MCH6 92 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 PROB1E7EW31 1015 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
CASP4-210ENST00000531546 RBP3P10745 1247 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 EN2P19622 333 aaPredicted RBP6.32□□□□□ -1.4
CASP4-210ENST00000531546 XPAP23025 273 aaPredicted RBP6.32□□□□□ -1.4
CASP4-210ENST00000531546 CD40P25942 277 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 PTH2RP49190 550 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 TP53BP2Q13625 1128 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 CCDC178Q5BJE1 867 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 SP5Q6BEB4 398 aaPredicted RBP6.32□□□□□ -1.4
CASP4-210ENST00000531546 RGMBQ6NW40 437 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 USP50Q70EL3 339 aaPredicted RBP6.32□□□□□ -1.4
CASP4-210ENST00000531546 FERMT2Q96AC1 680 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 DUSP26Q9BV47 211 aa6.32□□□□□ -1.4
CASP4-210ENST00000531546 TESQ9UGI8 421 aaKnown RBP6.32□□□□□ -1.4
CASP4-210ENST00000531546 KIF24Q5T7B8 1368 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 SPTBN5Q9NRC6 3674 aaKnown RBP6.31□□□□□ -1.4
CASP4-210ENST00000531546 MYADML2A6NDP7 307 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 EGR2P11161 476 aaPredicted RBP6.31□□□□□ -1.4
CASP4-210ENST00000531546 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
CASP4-210ENST00000531546 GPR15P49685 360 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 NRG3P56975 720 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 PDCD4Q53EL6 469 aaKnown RBP6.31□□□□□ -1.4
CASP4-210ENST00000531546 HSP90AB2PQ58FF8 381 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 UBE2R2Q712K3 238 aaPredicted RBP6.31□□□□□ -1.4
CASP4-210ENST00000531546 ASB10Q8WXI3 467 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 ADAM2Q99965 735 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 POLR3GLQ9BT43 218 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 BCORQ6W2J9 1755 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 INSRP06213 1382 aa6.31□□□□□ -1.4
CASP4-210ENST00000531546 MARCH11A6NNE9 402 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 CBX4O00257 560 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 PPM1GO15355 546 aaPredicted RBP6.3□□□□□ -1.4
CASP4-210ENST00000531546 DNAJC8O75937 253 aaPredicted RBP6.3□□□□□ -1.4
CASP4-210ENST00000531546 SPDEFO95238 335 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 HSPA5P11021 654 aaKnown RBP6.3□□□□□ -1.4
CASP4-210ENST00000531546 ITGAMP11215 1152 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 EFCAB12Q6NXP0 572 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 LMBR1LQ6UX01 489 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 OLFM4Q6UX06 510 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 SYT12Q8IV01 421 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 FAM122AQ96E09 287 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 FPGT-TNNI3KV9GXZ4 949 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 ARFGEF2Q9Y6D5 1785 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 FLT4P35916 1363 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 COL15A1P39059 1388 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 ZNF831Q5JPB2 1677 aa6.3□□□□□ -1.4
CASP4-210ENST00000531546 WASHC2AQ641Q2 1341 aa6.29□□□□□ -1.4
CASP4-210ENST00000531546 FZD9O00144 591 aa6.29□□□□□ -1.4
CASP4-210ENST00000531546 PHKG2P15735 406 aa6.29□□□□□ -1.4
CASP4-210ENST00000531546 PLA2G5P39877 138 aa6.29□□□□□ -1.4
CASP4-210ENST00000531546 APBA1Q02410 837 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms