RNA–Protein interactions for RNA: ENST00000531140.1

SC5D-207, Transcript of sterol-C5-desaturase, humanhuman

TSL 1 (best)

Gene SC5D, Length 767 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-207ENST00000531140 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.32
SC5D-207ENST00000531140 PIEZO1Q92508 2521 aa17.02■□□□□ 0.31
SC5D-207ENST00000531140 SF3B1O75533 1304 aaKnown RBP eCLIP17.01■□□□□ 0.314e-6■■■■■ 191.3
SC5D-207ENST00000531140 LRRIQ3A6PVS8 624 aaPredicted RBP17.01■□□□□ 0.31
SC5D-207ENST00000531140 BECN2A8MW95 431 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 ZC3H11AO75152 810 aaKnown RBP eCLIP17.01■□□□□ 0.31
SC5D-207ENST00000531140 DDHD2O94830 711 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 EFEMP2O95967 443 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 TPM2P07951 284 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 DLATP10515 647 aaKnown RBP17.01■□□□□ 0.31
SC5D-207ENST00000531140 ZNF18P17022 549 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 MRE11P49959 708 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 TFAMQ00059 246 aaKnown RBP17.01■□□□□ 0.31
SC5D-207ENST00000531140 MYO1EQ12965 1108 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 MAN2A1Q16706 1144 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 ZNF280BQ86YH2 543 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 RDH13Q8NBN7 331 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 ZSWIM2Q8NEG5 633 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 CCDC127Q96BQ5 260 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 IGSF21Q96ID5 467 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 CNOT6LQ96LI5 555 aaKnown RBP17.01■□□□□ 0.31
SC5D-207ENST00000531140 ADAM7Q9H2U9 754 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.01■□□□□ 0.31
SC5D-207ENST00000531140 SCN1AP35498 2009 aa17.01■□□□□ 0.31
SC5D-207ENST00000531140 PODXLO00592 558 aa17■□□□□ 0.31
SC5D-207ENST00000531140 SYN3O14994 580 aa17■□□□□ 0.31
SC5D-207ENST00000531140 C4BPAP04003 597 aaKnown RBP17■□□□□ 0.31
SC5D-207ENST00000531140 MTHFRP42898 656 aa17■□□□□ 0.31
SC5D-207ENST00000531140 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
SC5D-207ENST00000531140 CREMQ03060 361 aa17■□□□□ 0.31
SC5D-207ENST00000531140 NCAPHQ15003 741 aa17■□□□□ 0.31
SC5D-207ENST00000531140 TCP11X2Q5H9J9 407 aa17■□□□□ 0.31
SC5D-207ENST00000531140 GLRA4Q5JXX5 417 aa17■□□□□ 0.31
SC5D-207ENST00000531140 C9orf57Q5W0N0 161 aa17■□□□□ 0.31
SC5D-207ENST00000531140 DPH6Q7L8W6 267 aa17■□□□□ 0.31
SC5D-207ENST00000531140 TRAPPC11Q7Z392 1133 aa17■□□□□ 0.31
SC5D-207ENST00000531140 DDX53Q86TM3 631 aaKnown RBP17■□□□□ 0.31
SC5D-207ENST00000531140 IRF2BP1Q8IU81 584 aa17■□□□□ 0.31
SC5D-207ENST00000531140 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
SC5D-207ENST00000531140 VPS52Q8N1B4 723 aa17■□□□□ 0.31
SC5D-207ENST00000531140 FBXL6Q8N531 539 aa17■□□□□ 0.31
SC5D-207ENST00000531140 C1orf127Q8N9H9 656 aa17■□□□□ 0.31
SC5D-207ENST00000531140 CXorf38Q8TB03 319 aa17■□□□□ 0.31
SC5D-207ENST00000531140 FAM212AQ96EL1 285 aa17■□□□□ 0.31
SC5D-207ENST00000531140 FAM81BQ96LP2 452 aa17■□□□□ 0.31
SC5D-207ENST00000531140 RIPOR3Q96MK2 946 aa17■□□□□ 0.31
SC5D-207ENST00000531140 APOL5Q9BWW9 433 aa17■□□□□ 0.31
SC5D-207ENST00000531140 PLXNA4Q9HCM2 1894 aa17■□□□□ 0.31
SC5D-207ENST00000531140 DZANK1Q9NVP4 752 aa17■□□□□ 0.31
SC5D-207ENST00000531140 ADAM28Q9UKQ2 775 aa17■□□□□ 0.31
SC5D-207ENST00000531140 DAAM1Q9Y4D1 1078 aa17■□□□□ 0.31
SC5D-207ENST00000531140 NT5C1B-RDH14C9J2C7 533 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 NRP1O14786 923 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 CLASP2O75122 1294 aaKnown RBP16.99■□□□□ 0.31
SC5D-207ENST00000531140 SLC11A1P49279 550 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 TAF6P49848 677 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 MXI1P50539 228 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 PTPN5P54829 565 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 SOX4Q06945 474 aaPredicted RBP16.99■□□□□ 0.31
SC5D-207ENST00000531140 IQCB1Q15051 598 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 SV2CQ496J9 727 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 PPFIBP1Q86W92 1011 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 TTC39CQ8N584 583 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 CCDC150Q8NCX0 1101 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 IMPG2Q9BZV3 1241 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 MTMR12Q9C0I1 747 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 IRF2BPLQ9H1B7 796 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 GDAP2Q9NXN4 497 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 DSEQ9UL01 958 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 HCFC2Q9Y5Z7 792 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 IRAK3Q9Y616 596 aa16.99■□□□□ 0.31
SC5D-207ENST00000531140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.98■□□□□ 0.31
SC5D-207ENST00000531140 KCNJ18B7U540 433 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 M0QZQ0 153 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 B3GAT3O94766 335 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 AFPP02771 609 aaKnown RBP16.98■□□□□ 0.31
SC5D-207ENST00000531140 P4HA1P13674 534 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 OR1G1P47890 313 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 CLCNKBP51801 687 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 KCNJ12Q14500 433 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 SGSM1Q2NKQ1 1148 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 ATAT1Q5SQI0 421 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 C1orf220Q5T0J3 134 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
SC5D-207ENST00000531140 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
SC5D-207ENST00000531140 FBXL13Q8NEE6 735 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 C18orf25Q96B23 403 aaPredicted RBP16.98■□□□□ 0.31
SC5D-207ENST00000531140 SUSD3Q96L08 255 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 MARCH5Q9NX47 278 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 DNAJB4Q9UDY4 337 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 TUBGCP4Q9UGJ1 667 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 TECTAO75443 2155 aa16.98■□□□□ 0.31
SC5D-207ENST00000531140 C5orf42Q9H799 3197 aa16.97■□□□□ 0.31
SC5D-207ENST00000531140 CASTOR2A6NHX0 329 aa16.97■□□□□ 0.31
SC5D-207ENST00000531140 GOLGA6L19H0YKK7 550 aa16.97■□□□□ 0.31
SC5D-207ENST00000531140 CTSAP10619 480 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms