RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 MRPL58Q14197 206 aaKnown RBP16.45■□□□□ 0.22
CCS-206ENST00000530961 DUSP6Q16828 381 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 KRT39Q6A163 491 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 ADGRD2Q7Z7M1 963 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 KLHL5Q96PQ7 755 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 NAT10Q9H0A0 1025 aaKnown RBP16.45■□□□□ 0.22
CCS-206ENST00000530961 THAP9Q9H5L6 903 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 VRTNQ9H8Y1 702 aa16.45■□□□□ 0.22
CCS-206ENST00000530961 HUS1O60921 280 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 CYP11A1P05108 521 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 ADH1AP07327 375 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 FAM163BP0C2L3 166 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 KLRC2P26717 231 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 NRIP1P48552 1158 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 YWHAHQ04917 246 aaPredicted RBP16.44■□□□□ 0.22
CCS-206ENST00000530961 HYAL1Q12794 435 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 PSMD5Q16401 504 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 SGSM1Q2NKQ1 1148 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 DCAF17Q5H9S7 520 aaPredicted RBP16.44■□□□□ 0.22
CCS-206ENST00000530961 VARS2Q5ST30 1063 aaKnown RBP16.44■□□□□ 0.22
CCS-206ENST00000530961 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 PRSS55Q6UWB4 352 aaPredicted RBP16.44■□□□□ 0.22
CCS-206ENST00000530961 DPH6Q7L8W6 267 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 RBM23Q86U06 439 aaKnown RBP16.44■□□□□ 0.22
CCS-206ENST00000530961 METTL23Q86XA0 190 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 FAM114A1Q8IWE2 563 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 EFHBQ8N7U6 833 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 SPATA18Q8TC71 538 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 TAF4BQ92750 862 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 SLC35C1Q96A29 364 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 MTRRQ9UBK8 725 aa16.44■□□□□ 0.22
CCS-206ENST00000530961 PER2O15055 1255 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 PMM2O15305 246 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 TEX28O15482 410 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 CLASP2O75122 1294 aaKnown RBP16.43■□□□□ 0.22
CCS-206ENST00000530961 NDUFV1P49821 464 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 MYL6P60660 151 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 COL19A1Q14993 1142 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 ZNF280DQ6N043 979 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 TMEM184AQ6ZMB5 413 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 TRIM59Q8IWR1 403 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 TMEM86AQ8N2M4 240 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 TOP6BLQ8N6T0 577 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 CCDC150Q8NCX0 1101 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
CCS-206ENST00000530961 XYLT2Q9H1B5 865 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 DPP7Q9UHL4 492 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 CFAP54Q96N23 3096 aa16.43■□□□□ 0.22
CCS-206ENST00000530961 MYH11P35749 1972 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 FNDC1Q4ZHG4 1894 aaPredicted RBP16.42■□□□□ 0.22
CCS-206ENST00000530961 P4HA2O15460 535 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 TBC1D4O60343 1298 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
CCS-206ENST00000530961 VNN1O95497 513 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 SRGAP2BP0DMP2 458 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 MXI1P50539 228 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 ADAM15Q13444 863 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 WDR72Q3MJ13 1102 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 SCARA3Q6AZY7 606 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 SLC8B1Q6J4K2 584 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 THEM5Q8N1Q8 247 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
CCS-206ENST00000530961 CLSTN3Q9BQT9 956 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 IMPG2Q9BZV3 1241 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 IGFLR1Q9H665 355 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 MAGEC2Q9UBF1 373 aaPredicted RBP16.42■□□□□ 0.22
CCS-206ENST00000530961 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCS-206ENST00000530961 TIMM13Q9Y5L4 95 aaPredicted RBP16.42■□□□□ 0.22
CCS-206ENST00000530961 WDFY4Q6ZS81 3184 aa16.42■□□□□ 0.22
CCS-206ENST00000530961 SYCE3A1L190 88 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 OR6C75A6NL08 312 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 HLA-DRAP01903 254 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 P4HA1P13674 534 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 PRKCSHP14314 528 aaPredicted RBP16.41■□□□□ 0.22
CCS-206ENST00000530961 PIK3CAP42336 1068 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 LHX1P48742 406 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 TNNC1P63316 161 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 CETN1Q12798 172 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 KCNC3Q14003 757 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 RAB33AQ14088 237 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 ZNF699Q32M78 642 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 ZNF667Q5HYK9 610 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 WSCD1Q658N2 575 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 ELMSAN1Q6PJG2 1045 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 C11orf57Q6ZUT1 292 aaPredicted RBP16.41■□□□□ 0.22
CCS-206ENST00000530961 LIMS2Q7Z4I7 341 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 IRF2BP1Q8IU81 584 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 CREBRFQ8IUR6 639 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 FBXL13Q8NEE6 735 aa16.41■□□□□ 0.22
CCS-206ENST00000530961 TAS1R2Q8TE23 839 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms