RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 PTPRJQ12913 1337 aa16.12■□□□□ 0.17
PPFIA1-216ENST00000530746 OR6C75A6NL08 312 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 CYB561D2O14569 222 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 EXOC3O60645 756 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 XYLBO75191 536 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 TNNC2P02585 160 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 POU2F2P09086 479 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 CPB1P15086 417 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 RBP5P82980 135 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 PNOCQ13519 176 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 PSMD6Q15008 389 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 DUOXA2Q1HG44 320 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 LMBRD2Q68DH5 695 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 OTOP3Q7RTS5 596 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 TCEAL8Q8IYN2 117 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 LRRC52Q8N7C0 313 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 OR5B17Q8NGF7 314 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 ACSF2Q96CM8 615 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 FNBP1Q96RU3 617 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 C1QTNF1Q9BXJ1 281 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 AFF4Q9UHB7 1163 aaKnown RBP16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 SIX4Q9UIU6 781 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 MAFFQ9ULX9 164 aa16.11■□□□□ 0.17
PPFIA1-216ENST00000530746 PRRG1O14668 218 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 CCL16O15467 120 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 PRPF40AO75400 957 aaKnown RBP16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 KRT19P08727 400 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 DLATP10515 647 aaKnown RBP16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 TNNI1P19237 187 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 ADCY1Q08828 1119 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 MYBPC2Q14324 1141 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 SCARA3Q6AZY7 606 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 RNF19BQ6ZMZ0 732 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 METTL23Q86XA0 190 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 ZDHHC14Q8IZN3 488 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 GUF1Q8N442 669 aaKnown RBP16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 CCDC127Q96BQ5 260 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 MFSD14AQ96MC6 490 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 CYP4F11Q9HBI6 524 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 POLIQ9UNA4 740 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 MAPK8IP1Q9UQF2 711 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 TRAF3IP3Q9Y228 551 aa16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 R3HCC1Q9Y3T6 440 aaKnown RBP16.1■□□□□ 0.17
PPFIA1-216ENST00000530746 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 SEC24AO95486 1093 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 NR3C1P04150 777 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 OR4Q2P0C623 313 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 GPR17Q13304 367 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 WSCD1Q658N2 575 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 GRASPQ7Z6J2 395 aaPredicted RBP16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 THEM5Q8N1Q8 247 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 CGRRF1Q99675 332 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 RMND1Q9NWS8 449 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 HOOK1Q9UJC3 728 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 INSL5Q9Y5Q6 135 aa16.09■□□□□ 0.17
PPFIA1-216ENST00000530746 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 SMC2O95347 1197 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 LRG1P02750 347 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 BFSP1Q12934 665 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 MYO1EQ12965 1108 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 PTPN21Q16825 1174 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 TRAPPC11Q7Z392 1133 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 ELOA2Q8IYF1 753 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 OR10T2Q8NGX3 314 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 SPATA20Q8TB22 786 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 RTP3Q9BQQ7 232 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 GZF1Q9H116 711 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 GDAP2Q9NXN4 497 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.16
PPFIA1-216ENST00000530746 KINO60870 393 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 HUS1O60921 280 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 VNN2O95498 520 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 FSHRP23945 695 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 NTHL1P78549 312 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 NFIL3Q16649 462 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 GET4Q7L5D6 327 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 SMYD4Q8IYR2 804 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 PDCL2Q8N4E4 241 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 TOP6BLQ8N6T0 577 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 EDAQ92838 391 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 SMARCE1Q969G3 411 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 HPDLQ96IR7 371 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 TMEM209Q96SK2 561 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 ZCWPW1Q9H0M4 648 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 C11orf16Q9NQ32 467 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 HCFC1R1Q9NWW0 138 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 PCDHA5Q9Y5H7 936 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 SNX9Q9Y5X1 595 aa16.07■□□□□ 0.16
PPFIA1-216ENST00000530746 TECTAO75443 2155 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms