RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 GNEQ9Y223 722 aaKnown RBP5.3□□□□□ -1.56
GMDS-207ENST00000530459 UBE4BO95155 1302 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SPATA31A5Q5VU36 1347 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SPATA31A6Q5VVP1 1343 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SPATA31A7Q8IWB4 1347 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SH3PXD2BA1X283 911 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SMCO2A6NFE2 343 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 TMEM110-MUSTN1A8MSY1 372 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CAPN14A8MX76 684 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 USP17L12C9JPN9 530 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 USP17L21D6R901 530 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 C6orf229H3BNL8 230 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 PMM2O15305 246 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 P4HA2O15460 535 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CCNT2O60583 730 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 LRRN2O75325 713 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 ADAMTS2O95450 1211 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CYP1A2P05177 515 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 TFAP2AP05549 437 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CD48P09326 243 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 HARSP12081 509 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 ATF2P15336 505 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CHRNB2P17787 502 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 VCLP18206 1134 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 COMTP21964 271 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 VARSP26640 1264 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 ADSSP30520 456 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CETN2P41208 172 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SLC1A1P43005 524 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 MAGEA4P43358 317 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 NOVP48745 357 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CEBPAP49715 358 aaPredicted RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 ARFIP2P53365 341 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 ITGA8P53708 1063 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 NAPAP54920 295 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 GSTM4Q03013 218 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 EVX2Q03828 476 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CBLBQ13191 982 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 MYBPC2Q14324 1141 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DRAP1Q14919 205 aaPredicted RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 SF3B3Q15393 1217 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 SLC1A5Q15758 541 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SLC15A2Q16348 729 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 BCL2A1Q16548 175 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CCNG2Q16589 344 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.29□□□□□ -1.56
GMDS-207ENST00000530459 PLEKHG4Q58EX7 1191 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 EFHC2Q5JST6 749 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 RC3H1Q5TC82 1133 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 PCNX4Q63HM2 1172 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DUS1LQ6P1R4 473 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 HEATR3Q7Z4Q2 680 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DHDDSQ86SQ9 333 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 TMEM110Q86TL2 294 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CCDC25Q86WR0 208 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 GLYCTKQ8IVS8 523 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 MAP7D3Q8IWC1 876 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SCUBE1Q8IWY4 988 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 AHI1Q8N157 1196 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 REXO1Q8N1G1 1221 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 MIGA1Q8NAN2 632 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 ERMNQ8TAM6 284 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 PLEKHO2Q8TD55 490 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 EPS8L1Q8TE68 723 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DQX1Q8TE96 717 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 TMEM174Q8WUU8 243 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 KRT35Q92764 455 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 KHSRPQ92945 711 aaKnown RBP eCLIP5.29□□□□□ -1.561e-7■■□□□ 12.7
GMDS-207ENST00000530459 HLA-CQ95604 372 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 VPS50Q96JG6 964 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 PANX3Q96QZ0 392 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 HNRNPABQ99729 332 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 AGPAT1Q99943 283 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DDX50Q9BQ39 737 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 CORO1BQ9BR76 489 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DHRS4Q9BTZ2 278 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 YIPF2Q9BWQ6 316 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CRNKL1Q9BZJ0 848 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 DCLK3Q9C098 648 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 KLHL4Q9C0H6 718 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 THAP2Q9H0W7 228 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 EBF3Q9H4W6 596 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 KCNK13Q9HB14 408 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 S100A14Q9HCY8 104 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 MLXIPLQ9NP71 852 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 DCP1AQ9NPI6 582 aaPredicted RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 IL17RBQ9NRM6 502 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 METTL5Q9NRN9 209 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 KCNK4Q9NYG8 393 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 TMOD4Q9NZQ9 345 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SPATA7Q9P0W8 599 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 GCNT4Q9P109 453 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 HEY2Q9UBP5 337 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 ABCF2Q9UG63 623 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 SAP30BPQ9UHR5 308 aaKnown RBP5.29□□□□□ -1.56
GMDS-207ENST00000530459 DNAJC12Q9UKB3 198 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 ASAP1Q9ULH1 1129 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 GRID1Q9ULK0 1009 aa5.29□□□□□ -1.56
GMDS-207ENST00000530459 CHMP2BQ9UQN3 213 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms