RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ATXN3LQ9H3M9 355 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 SMOC1Q9H4F8 434 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
COPB1-207ENST00000529866 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
COPB1-207ENST00000529866 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.39□□□□□ -0.59
COPB1-207ENST00000529866 OR6C75A6NL08 312 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 C4orf47A7E2U8 309 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 MED24O75448 989 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 MCF2P10911 925 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 AMPD2Q01433 879 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 CREB5Q02930 508 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 ST3GAL1Q11201 340 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 STXBP5Q5T5C0 1151 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 GPR158Q5T848 1215 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 TCEAL6Q6IPX3 200 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 USP37Q86T82 979 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 TCEAL3Q969E4 200 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 PSMG2Q969U7 264 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 ZMAT2Q96NC0 199 aaKnown RBP11.38□□□□□ -0.59
COPB1-207ENST00000529866 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 ACO2Q99798 780 aaKnown RBP11.38□□□□□ -0.59
COPB1-207ENST00000529866 TCHPQ9BT92 498 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 LRRC3Q9BY71 257 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 DNAJC25Q9H1X3 360 aa11.38□□□□□ -0.59
COPB1-207ENST00000529866 CCDC169A6NNP5 214 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 SOBPA7XYQ1 873 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 WNT7AO00755 349 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 PFKFB2O60825 505 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 OAZ2O95190 189 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 CAVIN2O95810 425 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 FDPSP14324 419 aaKnown RBP11.37□□□□□ -0.59
COPB1-207ENST00000529866 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
COPB1-207ENST00000529866 MUTP22033 750 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 RPA1P27694 616 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 GABRR2P28476 465 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 WEE1P30291 646 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 CDC25CP30307 473 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 TNK2Q07912 1038 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 DUSP4Q13115 394 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 GPR17Q13304 367 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
COPB1-207ENST00000529866 VEPH1Q14D04 833 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 MPZL3Q6UWV2 235 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 NECAB1Q8N987 351 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 ZCCHC14Q8WYQ9 949 aaKnown RBP11.37□□□□□ -0.59
COPB1-207ENST00000529866 C18orf25Q96B23 403 aaPredicted RBP11.37□□□□□ -0.59
COPB1-207ENST00000529866 TASP1Q9H6P5 420 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 ZMYM5Q9UJ78 669 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 TICRRQ7Z2Z1 1910 aa11.37□□□□□ -0.59
COPB1-207ENST00000529866 M0QZQ0 153 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 GIPC1O14908 333 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 RNF40O75150 1001 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 SEC24BO95487 1268 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 PRAMEF12O95522 483 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 APBB3O95704 486 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 NEFLP07196 543 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 HARSP12081 509 aaKnown RBP11.36□□□□□ -0.59
COPB1-207ENST00000529866 CEACAM1P13688 526 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 CSRP1P21291 193 aaKnown RBP11.36□□□□□ -0.59
COPB1-207ENST00000529866 HOXC13P31276 330 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 FOSBP53539 338 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 TRIM29Q14134 588 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 ME3Q16798 604 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 FBXO43Q4G163 708 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 TMEM196Q5HYL7 178 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 PKN3Q6P5Z2 889 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 GAREM2Q75VX8 874 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 DNAJB7Q7Z6W7 309 aaPredicted RBP11.36□□□□□ -0.59
COPB1-207ENST00000529866 GPIHBP1Q8IV16 184 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 ACDQ96AP0 544 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 LRRC3BQ96PB8 259 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 HHIPQ96QV1 700 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 MKNK1Q9BUB5 465 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 TMEM134Q9H6X4 195 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 PTPRHQ9HD43 1115 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 TMEM9BQ9NQ34 198 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
COPB1-207ENST00000529866 RALGAPA1Q6GYQ0 2036 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 LNP1A1A4G5 178 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 BCLAF3A2AJT9 711 aaKnown RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 MTMR11A4FU01 709 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 SRRM3A6NNA2 597 aaPredicted RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 KHNYNO15037 678 aaKnown RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 JAK2O60674 1132 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 OR4Q2P0C623 313 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 SPINK2P20155 84 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 DRD1P21728 446 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 GBP1P32455 592 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 MCM7P33993 719 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 AVPR1AP37288 418 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
COPB1-207ENST00000529866 TAF12Q16514 161 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms