RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 DMP1Q13316 513 aaPredicted RBP15.02■□□□□ -0
USP48-213ENST00000529637 ALCAMQ13740 583 aa15.02■□□□□ -0
USP48-213ENST00000529637 CLUL1Q15846 466 aa15.02■□□□□ -0
USP48-213ENST00000529637 CCDC6Q16204 474 aa15.02■□□□□ -0
USP48-213ENST00000529637 PPP1R21Q6ZMI0 780 aa15.02■□□□□ -0
USP48-213ENST00000529637 RFX8Q6ZV50 586 aa15.02■□□□□ -0
USP48-213ENST00000529637 MAML1Q92585 1016 aa15.02■□□□□ -0
USP48-213ENST00000529637 FGD4Q96M96 766 aa15.02■□□□□ -0
USP48-213ENST00000529637 PI4K2AQ9BTU6 479 aa15.02■□□□□ -0
USP48-213ENST00000529637 UBE2OQ9C0C9 1292 aaKnown RBP15.02■□□□□ -0
USP48-213ENST00000529637 UBN1Q9NPG3 1134 aa15.02■□□□□ -0
USP48-213ENST00000529637 EURLQ9NYK6 297 aa15.02■□□□□ -0
USP48-213ENST00000529637 G3BP2Q9UN86 482 aaKnown RBP15.02■□□□□ -0
USP48-213ENST00000529637 HNRNPDLO14979 420 aaKnown RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 TBX10O75333 385 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 MARK3P27448 753 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 GCAP28676 217 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 ADCY8P40145 1251 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 RANBP1P43487 201 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 CACNA2D1P54289 1103 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 HADHBP55084 474 aaKnown RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 KPNB1Q14974 876 aaKnown RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 SLC1A5Q15758 541 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 IRGCQ6NXR0 463 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 CAPN12Q6ZSI9 719 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 KBTBD2Q8IY47 623 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 SYTL5Q8TDW5 730 aaPredicted RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 SNF8Q96H20 258 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 PRR11Q96HE9 360 aaPredicted RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 KREMEN1Q96MU8 473 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 NT5C1BQ96P26 610 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 KMT5AQ9NQR1 393 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.02□□□□□ -0.01
USP48-213ENST00000529637 LGALS13Q9UHV8 139 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 ANAPC5Q9UJX4 755 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 CNTNAP1P78357 1384 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 DHX15O43143 795 aaKnown RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 GGPS1O95749 300 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 ITIH2P19823 946 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 KCNA3P22001 575 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 VHLP40337 213 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 SSR1P43307 286 aaKnown RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 HSD17B4P51659 736 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 PDCD2Q16342 344 aaPredicted RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 C2CD6Q53TS8 623 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 LMBRD2Q68DH5 695 aaPredicted RBP15.02□□□□□ -0.01
USP48-213ENST00000529637 DENND1AQ8TEH3 1009 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 WDR60Q8WVS4 1066 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 SEMA4DQ92854 862 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 CEP170P1Q96L14 293 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 WNT8AQ9H1J5 351 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 NPHS2Q9NP85 383 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 SCOCQ9UIL1 159 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 DCTN4Q9UJW0 460 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 EXOC7Q9UPT5 735 aa15.02□□□□□ -0.01
USP48-213ENST00000529637 CAPN9O14815 690 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 EDF1O60869 148 aaKnown RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 UBTFL6P0CB48 400 aaPredicted RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 GJC1P36383 396 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 OVGP1Q12889 678 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 CTC1Q2NKJ3 1217 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 B3GNT9Q6UX72 402 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 OTOAQ7RTW8 1153 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 CCDC125Q86Z20 511 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 TTLL6Q8N841 843 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 TAS1R2Q8TE23 839 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 VCXQ9H320 206 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 C12orf65Q9H3J6 166 aaKnown RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 LRCH1Q9Y2L9 728 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 ZNF536O15090 1300 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 ASTN2O75129 1339 aaPredicted RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 PIAS1O75925 651 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 PTPN4P29074 926 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 PSMC5P62195 406 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 ZC3H12AQ5D1E8 599 aaKnown RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 KRT39Q6A163 491 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 C12orf50Q8NA57 414 aaPredicted RBP15.01□□□□□ -0.01
USP48-213ENST00000529637 TBC1D22BQ9NU19 505 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 ZFP69BQ9UJL9 534 aa15.01□□□□□ -0.01
USP48-213ENST00000529637 WDR91A4D1P6 747 aa15□□□□□ -0.01
USP48-213ENST00000529637 WDR64B1ANS9 1081 aa15□□□□□ -0.01
USP48-213ENST00000529637 POC1B-GALNT4F8VUJ3 575 aa15□□□□□ -0.01
USP48-213ENST00000529637 MAGEB2O15479 319 aa15□□□□□ -0.01
USP48-213ENST00000529637 ZCCHC18P0CG32 403 aa15□□□□□ -0.01
USP48-213ENST00000529637 PTGER2P43116 358 aa15□□□□□ -0.01
USP48-213ENST00000529637 SERPINB4P48594 390 aa15□□□□□ -0.01
USP48-213ENST00000529637 MYBPC2Q14324 1141 aa15□□□□□ -0.01
USP48-213ENST00000529637 ZFYVE27Q5T4F4 411 aa15□□□□□ -0.01
USP48-213ENST00000529637 NLRP9Q7RTR0 991 aa15□□□□□ -0.01
USP48-213ENST00000529637 NLRX1Q86UT6 975 aa15□□□□□ -0.01
USP48-213ENST00000529637 PSPC1Q8WXF1 523 aaKnown RBP15□□□□□ -0.01
USP48-213ENST00000529637 CLEC4DQ8WXI8 215 aa15□□□□□ -0.01
USP48-213ENST00000529637 STRA6Q9BX79 667 aa15□□□□□ -0.01
USP48-213ENST00000529637 HEMGNQ9BXL5 484 aa15□□□□□ -0.01
USP48-213ENST00000529637 KANSL3Q9P2N6 904 aa15□□□□□ -0.01
USP48-213ENST00000529637 STOML1Q9UBI4 398 aa15□□□□□ -0.01
USP48-213ENST00000529637 DYNC1LI1Q9Y6G9 523 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms